| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5982 |
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| Symbol | |
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| ID | 7975267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 709272 |
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| End bp | 710843 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796545 |
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| Product | transposase IS66 |
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| Protein accession | YP_002947819 |
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| Protein GI | 239820634 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3436] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGACA CGGCCGACCT TGACCACCTG GACGCGCAGC AACTGCGCGA GATGGTCCTC
TCCCTGAGGA GAGGGGCGGC AGCCGACAAG CTCGAGATCG CACGCCGCGA CCACGAGATC
GCGTTCAAGC AAGCGGCCAT CGACAAGCTC ACGCACGAGA TGGCCGTGCT CAAGCGACTG
AAGTTCGCCG CCAAGTCGGA AGCCTTCAAT GCCGAGCAGA AGAGCCTGCT GGAGGAGACC
ATCGACGCCG ACTTGGCAGC GATGGAGCGT GAGCTGGAGG ACCTCGCGGC GGTGCCGGCC
GCGCAGCGCG AGAAGCAGCA ACCCAAGCGC CAGGCACTGC CCGCGCACCT GCCGCGCCGG
GAGATCCGCC ACGAGCCCGA GAGCACCACC TGTGCCTGCG GCTGCACGCT CCAGCGCATC
GGTGAGGATG TGGCCGAGAA GCTCGACTAC CAGCCAGGCG TGTTCAGCGT CGAGCGCCAC
GTGCGCGGCA AGTGGGTCTG CACGAACTGC GAGACGCTGG TGCAGGCGCC CGTCGCCCCG
CACATCATCG ACAAGGGCAT CCCGACGGCT GGGCTGCTCT CGCAGGTGCT GGTGGGCAAG
TACCTGGACC ACTTGCCGCT GTACAGGCAG GAAGCCATCT TCGGTCGCGC GGGCCTCGCC
ATCCCGCGCT CGACGCTGGC CAGTTGGGTT GGACAGTGCG GCGTGCAGCT GCAGCCTCTG
GTCGACGCGC TCAAGTGCGA GATGCTCGAA GACCGCGTGC TGCATGCCGA CGAGACGCCG
GTGGCGATGC TCAAGCCCGG CAACGGCAAG ACACACCGGG CGTACCTGTG GAGCTACTGC
ACGACGAGCT ACAGCGCGCT GCGCGCGGTG GTGTTCGACT TCGCCGACAG CCGCGGCGGC
CAGCATGCGC GCGCCTTCCT CGGGCTGCCG GGCGAGCATG GCTGGCGCGG CACACTGGTG
TGCGACGACT TCAGTGGCTA CAAGGCGTGC TTCGAGCTGG GCATCACCGA GGCGGGTTGC
CTGGCCCATG CAAGGCGCAA GTTCCACGAA CTCTGGGCCA ATCACGGCAG CCCGATCGGC
GAGCAGGCGC TGAAGTTCTT CGGCGAGCTC TACGCCGTCG AGCGCGAGGT TGCTGAGCTT
GTGCCTGAGG ATCGAAGGCG AATACGACAA GAGAGGTCGC GCAAGGTGGC TGATGCCCTG
CAGCAATGGC TCGCCGGGCA ACGGCAGAGG GTGCCGGATG GTTCGACCAC GGCCAGGGCA
ATCGACTACA GCCTCAAGCG CTGGCAGGCG CTCACGCGCT ACATCGACGA CGGCGATCTG
CCGGCGGACA ATAACTGGGT GGAGAACCAG ATCCGCCCGA TCGCCATCGG ACGATCGAAC
TGGCTGTTCG CGGGATCGCT ACGGGCAGGC CAGCGCGCCG CGGCCATCAT GAGCTTGATC
CAGTCAGCGA AGCTCAATGG ACATGAGCCG CACGCGTACC TCAGCGACAT TCTTGAGCGG
CTGCCTACTC ACCCGGCCAG TCGCGTCGGA GAGTTGCTGC CGCATCGCTG GCAGCCAGCC
GCAGTGCGCT GA
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| Protein sequence | MIDTADLDHL DAQQLREMVL SLRRGAAADK LEIARRDHEI AFKQAAIDKL THEMAVLKRL
KFAAKSEAFN AEQKSLLEET IDADLAAMER ELEDLAAVPA AQREKQQPKR QALPAHLPRR
EIRHEPESTT CACGCTLQRI GEDVAEKLDY QPGVFSVERH VRGKWVCTNC ETLVQAPVAP
HIIDKGIPTA GLLSQVLVGK YLDHLPLYRQ EAIFGRAGLA IPRSTLASWV GQCGVQLQPL
VDALKCEMLE DRVLHADETP VAMLKPGNGK THRAYLWSYC TTSYSALRAV VFDFADSRGG
QHARAFLGLP GEHGWRGTLV CDDFSGYKAC FELGITEAGC LAHARRKFHE LWANHGSPIG
EQALKFFGEL YAVEREVAEL VPEDRRRIRQ ERSRKVADAL QQWLAGQRQR VPDGSTTARA
IDYSLKRWQA LTRYIDDGDL PADNNWVENQ IRPIAIGRSN WLFAGSLRAG QRAAAIMSLI
QSAKLNGHEP HAYLSDILER LPTHPASRVG ELLPHRWQPA AVR
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