| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5979 |
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| Symbol | |
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| ID | 7975018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 706812 |
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| End bp | 707684 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644796542 |
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| Product | Taurine dioxygenase |
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| Protein accession | YP_002947816 |
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| Protein GI | 239820631 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGAAA ACCATTACGA GCACATCCGC GTGCGGCCGC AGCCGCACGC CTTCGGCGCC
GAGATCACCG GCCTATCGAT AAGCAGGCCG TTGCCGGCTC CCGTCCTCGA CGAAGTGAAG
AAGGCCTGGG CCGCACACTC GGTCGTCTAC TTTCCCGATC AACCGCTCAC GCATTCCGAA
CTGGAAGCGT TCACGCTGCA GTTCGGCGAA TTCGGGGTCG ACCCATACAT CGTCCCGATA
GAAGATCACC CGCACATCCT GGAACTACGG CGCGAGGCTG ACGAGAAGGC GGTCAACTTC
GGCGCGCAGT GGCACTCCGA CTGGAGCTTT CAGGAAGAGC CTCCCGCTGG GACCATCCTG
CACTCCAAGG TGACCCCGCC TGTCGGTGGC GACACGCTCT ATGCCGACGG CTATCGGGCC
TACGACGAAC TGTCGGACAC CATGAAGCGT CTGCTCGATG GCCTGGTGGC GATCCATTCA
GCAGGCATGC CTTACGGCAA GGACGGTCTG TTCGCCAAGG AAACGGAGAC GCGCTCGATG
AAAATCGTCG TCAGCGAGGA TGCCGACAAG ACATGGCCGC ATCCGCTGGT TCGCCTCCAT
CCGGTGACGC GCCGCAAGGC CCTGTACGTG AGCCCGGTCT ACACACAGGG CATCGAAGGA
ATGACGCGCG GCGAGTCCGC GGCGCTGCTG GGCTATCTCT ACCAGCACAT GGTGCGCGAC
GAGTACGTCT ATCGCCACCG CTGGGCGCCC AACATGCTCA CGCTCTGGGA CAACCGCTGC
ACCTTGCACA ACGCCGATGG CGGCTATGAC GGCCACCTGC GCGTGATGCA CCGAACCACC
ATCGCCGGCG AGCGTCCGCT CGCTGTCTCC TGA
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| Protein sequence | MVENHYEHIR VRPQPHAFGA EITGLSISRP LPAPVLDEVK KAWAAHSVVY FPDQPLTHSE
LEAFTLQFGE FGVDPYIVPI EDHPHILELR READEKAVNF GAQWHSDWSF QEEPPAGTIL
HSKVTPPVGG DTLYADGYRA YDELSDTMKR LLDGLVAIHS AGMPYGKDGL FAKETETRSM
KIVVSEDADK TWPHPLVRLH PVTRRKALYV SPVYTQGIEG MTRGESAALL GYLYQHMVRD
EYVYRHRWAP NMLTLWDNRC TLHNADGGYD GHLRVMHRTT IAGERPLAVS
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