| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5973 |
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| Symbol | |
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| ID | 7975012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 700594 |
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| End bp | 701358 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796536 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947810 |
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| Protein GI | 239820625 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGA TCCAGGGGCT CACCAAGCGC TTCGGCGGGC TGACAGCAGT CAACGATGTC
AGCACCTGCG TGGAGAAGGG CAAGGTCAAC GCGATCATCG GCCCGAATGG CGCGGGCAAG
ACGACGTTCT TCAACCTGAT CGGCGGCGTG CACCTACCGA GCGCCGGGCG CATTCTGCTC
AACGGCGAGG ATGTGACACG CTGCCGCGCC GACGACATGG CGTTGCGCGG CGTGGCCCGT
ACCTTTCAGT CGACCACCTT GTTCGACCTG TCGACGGTGC TCGACAACCT GATCGTCGGC
CATCGGCTGC GCACTCGCTC CGGCCTCTGG GACGCGGTGA CGGGGTCCCG GCGGCTTCGG
GATGAGGAGG CGCTGTGCCG TGCGAAGGCA CGCGCCGCGC TGGACTTCGT GGGGTTGTCG
CATCTGGAGC GGCGGCTGGC GGCGGACATC ACGCAGGAGG AGCGAAAGCG CGTCGCCTTC
GCCTTGGCGA TTGCCACCGA CGCGCAGCTG GTGCTGCTCG ACGAGCCGGC CGGCGGCGTC
AACCCGGAGG AAACGGTGGG ACTGGCGCTG CTCATCCGCA AGATGGTGCG CAGCGGCATC
ACCGTGTGCC TGATCGAACA CAAGATGGAC ATGATCATGC AGCTGGCCGA CAAGATCATG
GTGCTGAACT ACGGCGAGAA GATCGCCGAG GGTACGCCCG ACGAGATCAG GACGAACCCC
GCAGTGATCG ATGCCTACCT CGGGAGCGAG CATGCTGAAG CTTGA
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| Protein sequence | MLEIQGLTKR FGGLTAVNDV STCVEKGKVN AIIGPNGAGK TTFFNLIGGV HLPSAGRILL
NGEDVTRCRA DDMALRGVAR TFQSTTLFDL STVLDNLIVG HRLRTRSGLW DAVTGSRRLR
DEEALCRAKA RAALDFVGLS HLERRLAADI TQEERKRVAF ALAIATDAQL VLLDEPAGGV
NPEETVGLAL LIRKMVRSGI TVCLIEHKMD MIMQLADKIM VLNYGEKIAE GTPDEIRTNP
AVIDAYLGSE HAEA
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