| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5972 |
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| Symbol | |
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| ID | 7975011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 699903 |
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| End bp | 700607 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796535 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947809 |
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| Protein GI | 239820624 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAGC TTGAGCGCGT CTCGCTGAAC TACGGCAGCT TCAGGGCCTT GAGCGACATC
AGCCTGCAGG CCCGCGACGG TGAATTGGTC GTGCTGCTGG GCGCCAATGG CGCGGGCAAG
AGTTCGATCT TTCGCGCCGC GAGCGGACTG GAAGCTGCGA CGGGACACAT CCGTTTTGGT
AAACATGAAC TGATCGGCAT GCGGCCTTCG CAGATCGTCC AAGCCGGCGT CGTTCAATGT
CCGGAAGGGC GCAAGCTCTT TCCGGGCATG TCGGTACTGC GCAACCTCGT ACTCGGCGCC
TATGTTCACC GCACCGACAG TGCGGGAAAT CGCCGCCGGC TCGAAGAAAT CTTCGGCTTG
TTTCCGATCC TCGATCAGAA GAAGGACGAC CCGGCCGGCT CGTTGAGCGG CGGCCAGCAG
CAGATGGTGG CCATCGGCCG CGCCATGATG GGTCGGCCGC GCGCCCTGTT GCTCGACGAG
CCATCGCTCG GCCTGGCGCC GCTCGTGGTC CGGCAGATGT TCGATGTGAT CCAGCAGATC
AACCGTGCCG GCACCACCGT GCTGCTGGCC GAGCAGAACG CTTTCGCCGC TCTGAAGGTG
GCCCATCGGG CCTACGTGCT CGAGCTGGGC CGTGTCGCCA TGGAGGGCGA CAGCGATGCC
CTGCTGCGCA ACCCTGACAT CCGACGTGCC TACATCGGGG CCTGA
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| Protein sequence | MLKLERVSLN YGSFRALSDI SLQARDGELV VLLGANGAGK SSIFRAASGL EAATGHIRFG
KHELIGMRPS QIVQAGVVQC PEGRKLFPGM SVLRNLVLGA YVHRTDSAGN RRRLEEIFGL
FPILDQKKDD PAGSLSGGQQ QMVAIGRAMM GRPRALLLDE PSLGLAPLVV RQMFDVIQQI
NRAGTTVLLA EQNAFAALKV AHRAYVLELG RVAMEGDSDA LLRNPDIRRA YIGA
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