| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5965 |
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| Symbol | |
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| ID | 7975004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 690335 |
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| End bp | 692128 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796528 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_002947802 |
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| Protein GI | 239820617 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.744958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCC CCCAAACCCC AGCGGCCGCG GTCGACCCGG TCACCGTCGA GATCATTCGC
AACGGCCTGT ACGCCGTGAC GGAGGAGATG AAGACCAATC TCACGCGCAC CGCCTACAAC
CTGATCATCT ACGAGGCGCT GGACTTCACC GTCGGGCTCT TCACCAAGGA GGGCGACACG
GTCTCGATCG GCTTGGGCCT GCCGATGTTC ATCCGCGGCA TGTCCGAGAC GGTGAAGGCG
AAGATCAGGC ACTTCGGCTA CGAGAACATC CTGCCGGGCG ACATCCTGGT CACGAACGAC
GCCTACACCA CCGGCAGCCA CCTGAACCAC TTCACGTTCA CGATGCCGGT GTTCCACGAG
GGCAGGCTCG AAGGCTTCAC CTGCTGCATG GCGCACTGGC TCGACGTGGG CGGCACGCTC
GGCAACGTCA CCACCGACAT CTTCAGCGAG GGGATCCAGA TCCCCATCAT GAAGTACCAG
CGCGAAGGCG TCGTCAACCA GGACCTGATC GACATCATCG CGATGAACGT GCGGCTGGCC
GATCGCGCCC TGGGCGACCT GCGCGCCCAG ATCACCGCGA TCACCACCGG CGAGCGCCGC
TACGTGGAGC TGCTGCAGCG CTATGGCGTG GATGCAGTGA ACGGCTCGAT CCGCCAGATC
ATGGACTCTT CAGAGGCCGT GGCGCGCAAG AACACCCTGT CGATTCCCGA TGGCGTGTAC
GAGGCCGAGT CCTTCATGGA CGACGACGGA CTCGAGATTG GCAAGCGCAT CCCGATCCGC
GTCAAGGTGA CCGTCACCGG TGATGAGATG ACGGTGGACC TGTCCGACGT CAGCAAGCAG
GTTCGCGGCT TCTACAACTC GGGCTTCACC ACCGGCATCG CCTGCGCCCA GGTGGCCTAC
AAGTGCCTGA CCACGCCGAC CGATTACCCG GTCAACGACG GAAGCTTTCG CTCGCTGAAG
GTGATCATGC CGATGGGCAC GGTGATCAGT GCCGAGCGCC CGTACCCGAT GCGGGTGTGG
ATGACCTTCC CGATGACGGT GATCGACACG ATCTTCAAGG CACTGGCGCC AGCCATTCCC
GATCGCTCCA TCGCCGGCCA CCACGCCGAC TTGGTGTTTC CCAACATCCA CGGCATCTCG
CCAGAGGACG GGCGGCTCTT CATCGTCGGC ATCGGGCCGC TGGGCGGAGG CTGGGGCGCG
AAGTCGACGG AAGATGGCGT CTCGGTCACG GTCTGCATCA ACGACGGCGA CACCCACAAC
AGCCCGACCG AGCAGCTCGA GGCCAAGTAC CCGGTGCTGG TCGAGAAGTA CCAGATCCGT
CAGGACAGTG CCGGCGCCGG CCGGTACCGC GGCGGCCTGG GCGCGGAGAT GGTGGTGCAG
GCGCTCTCGC CCTTCACCGT CACCACCCGC ATCGACCGTG TCCACTGCAA GCCATGGGGC
CTGGAGGGCG GCGGAGACGC CATGGGCAAC GGCCTGGCCG TGCGGCACAA GGGCGAATGG
AAGAGCGACC ACCTGAACGC AAAGATCTTC AACGTGCGGC TGGAACGCGG CGATGCCTAC
AAGATGCTGT CGGGCGGCGG TGGCGGCTTC GGCGATCCGC TGGATCGGGA TATCGACCTG
GTCGCAGAGG ACGTGCGCGA GGGCTACGTG AGCAGCGAGG TGGCGCGCCG GGTCTATCGC
GTTGCGCTGG ACTCCAAAGG GCAGGTCGAC CAGGAGGCCA CGCGCACGCT CCGGAAGGCA
CCGAGCGCCT TGCGCAATGG CGCCTCGCTC GACGTCGCCT GGGACGGGCA GTGA
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| Protein sequence | MSTPQTPAAA VDPVTVEIIR NGLYAVTEEM KTNLTRTAYN LIIYEALDFT VGLFTKEGDT
VSIGLGLPMF IRGMSETVKA KIRHFGYENI LPGDILVTND AYTTGSHLNH FTFTMPVFHE
GRLEGFTCCM AHWLDVGGTL GNVTTDIFSE GIQIPIMKYQ REGVVNQDLI DIIAMNVRLA
DRALGDLRAQ ITAITTGERR YVELLQRYGV DAVNGSIRQI MDSSEAVARK NTLSIPDGVY
EAESFMDDDG LEIGKRIPIR VKVTVTGDEM TVDLSDVSKQ VRGFYNSGFT TGIACAQVAY
KCLTTPTDYP VNDGSFRSLK VIMPMGTVIS AERPYPMRVW MTFPMTVIDT IFKALAPAIP
DRSIAGHHAD LVFPNIHGIS PEDGRLFIVG IGPLGGGWGA KSTEDGVSVT VCINDGDTHN
SPTEQLEAKY PVLVEKYQIR QDSAGAGRYR GGLGAEMVVQ ALSPFTVTTR IDRVHCKPWG
LEGGGDAMGN GLAVRHKGEW KSDHLNAKIF NVRLERGDAY KMLSGGGGGF GDPLDRDIDL
VAEDVREGYV SSEVARRVYR VALDSKGQVD QEATRTLRKA PSALRNGASL DVAWDGQ
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