| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5963 |
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| Symbol | |
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| ID | 7975002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 688837 |
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| End bp | 689955 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796526 |
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| Product | cobalamin synthesis protein P47K |
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| Protein accession | YP_002947800 |
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| Protein GI | 239820615 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0523] Putative GTPases (G3E family) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.103061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCC ACTTCTCCTC GCTGCTGGCA GCCGACCAGC CCGGGCAGGT GCGCGTGCCC
GTGACGGTGC TGACCGGATT CCTCGGCAGC GGAAAGACGA CGCTCCTCAA CGAGCTGCTG
CGCGAACCTG ATCTGCACGG CACCGCAGTC ATCGTCAACG AGTTCGGTGA AATCGGCATC
GACCACGACC TGATCGCACA CACGACGGAA GACACCATCC TGCTGGCCAA CGGCTGCATG
TGCTGTGCGG TGCGCGGCGA TCTCATCGGC GCGCTGGTGG GACTCGTCGA GAGAGCCGTC
TCCGATGGCT CGGCGCTGTG CCAGGTATTG ATCGAAACCA GCGGCCTGGC CGACCCGGCC
CCGATCCTCC GGACCTTGAT GGGAGAGCCT GCCGTCAAGG ATCGCTTCAG GCTGGCGGGC
GTGTGCTGCA CGGTCGACGC AGTGCTGGCG TTTCGCACGC TGGATCGGCA TCCGGAGGCC
GCGCGGCAGA TCGCCATGGC CGACCACCTC TTCCTCACAA AGACCGACCT CCTGGGCGAA
CCGGCATCGC AGGCGTTGCT CGACTGCGTG AGGAGCCTGA ATCCCACGGG CACGGTGCAC
CAGCAGCGCG AAGTGCACGT GGCCGTGTTG CGGCAGACGA TGGAGACGCG CGCGGACGAC
GCGCGGCCGG TCCCCGCAGA GCGCGGGCTG TTCTACAGGC CGATGCCGGT CACCGGCGGC
CCAGGCGCCT CAGGCGAGCC ATCTCCCCAT TCGGGCGGGA TCACCTCATT CGTCCTAGTT
CGCGACGATC CGTTGCCGCG AGACGGCTTC TATGCCTGGC TCGACATGGT GATCGCGATG
CGGGGTGAAG ACCTGCTGCG TGTGAAAGGA ATCGTCAATC TGCAGGAGCA GCCGGAGCAG
CCGCTTGTCT TTCACGGCGT ACAGCATCTG TACCAGCCAC CGGTGTCATT GTCGGCTTGG
CCGAGCCCGG ACCGACGCAC CCGGATTGTC TTCATCACCC GAGGCGTCGA CGCGGAAGCG
ATGGACGAGT CTCTGCGCGT TTTCGAACGA CGTGGGCGGC AGAGGCGCCC TGCCGCGTCT
TCACCGGACC CCTCATCACA ACTCAAGGAG ACTCCATGA
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| Protein sequence | MSGHFSSLLA ADQPGQVRVP VTVLTGFLGS GKTTLLNELL REPDLHGTAV IVNEFGEIGI
DHDLIAHTTE DTILLANGCM CCAVRGDLIG ALVGLVERAV SDGSALCQVL IETSGLADPA
PILRTLMGEP AVKDRFRLAG VCCTVDAVLA FRTLDRHPEA ARQIAMADHL FLTKTDLLGE
PASQALLDCV RSLNPTGTVH QQREVHVAVL RQTMETRADD ARPVPAERGL FYRPMPVTGG
PGASGEPSPH SGGITSFVLV RDDPLPRDGF YAWLDMVIAM RGEDLLRVKG IVNLQEQPEQ
PLVFHGVQHL YQPPVSLSAW PSPDRRTRIV FITRGVDAEA MDESLRVFER RGRQRRPAAS
SPDPSSQLKE TP
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