| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5935 |
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| Symbol | |
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| ID | 7974974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 637235 |
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| End bp | 637438 |
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| Gene Length | 204 bp |
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| Protein Length | 67 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644796499 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002947773 |
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| Protein GI | 239820588 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCGCTTG GGACCGCCAT CAAGGCATTG CGCAAGACGC ATGGCATTTC ACAAGAAGAA
CTTGCGCATC GCAGCCACAT CGATCGCTCT TACATGAGCA GCATCGAAAG GGGGATGCAA
AACCCTGGCG TGATGACCGT TGTACAGATC GCCGCCGGCC TCGGCGTGTC CGTGGCCGAG
TTGGCGGCCA AGGCACGACT CTGA
|
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| Protein sequence | MALGTAIKAL RKTHGISQEE LAHRSHIDRS YMSSIERGMQ NPGVMTVVQI AAGLGVSVAE
LAAKARL
|
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| |