Gene Vapar_5924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5924 
Symbol 
ID7974963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp627993 
End bp629378 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content67% 
IMG OID644796491 
Productmercuric reductase 
Protein accessionYP_002947765 
Protein GI239820580 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.184883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGC GAGCGGTGGA TGCCATCATC ATTGGCGCCG GGCAGGCGGG CCCGTCGCTT 
GCAGGACGGC TGGATGCGAC GGGACACAAG GTGGTGCTGA TCGAGCGCCA TCTGGTCGGC
GGCACCTGCG TCAACACGGG TTGCAAACCC ACCAAGACGC TCATTGCGAG CGCCTACGCG
GCCCACACGG CCCGCCGCGG GAGCGACTAC GGCTTCTCCG TGGCATCCCC CGTCACGATG
GACATGCCGG CCGTTGCCGC CCGCGCTCGA AAGGTGATCC TCGATTCGCG CAGGGGCAAC
GAGGAATGGC TGGCGGGCAT GCGCAATGTC GAACTGATTC GCGGCCACGC CCGGTTCGTT
GCCGAGGGCA CTGTCGATGT CAACGACCAA AGACTGACCG CGCCGAAGAT CTTCATCAAT
GTCGGCGCAC GCGCGCAGGT GCCTGACCTG CCCGGCGTCG ACGAGGTGCC CTTTCTCACC
AACACCGACA TGGTCGCGCT GGAAACGCTG CCGCGCCGCC TGGTCATCGT GGGCGGCAGC
TACATCGGGC TGGAGTTCGC GCAGATGTAC CGCCGCTTTG GCGCCGAGGT CACGGTCGTG
GAGCGCGCGG ACCGTCTGAT CGCGCGCGAA GACCCGGATG TGTCATCCGC GGTCCGCGAG
ATCCTCGAGG CAGAGGGCAT TGCCATACGC ACCGGCGCGG AATGCATCAG CTTCAAGGCG
CACGAAACCG GCGTCTGCGT TGACGTGGAC TGCAAGGAGG GCGAACCATC GGTGACCGGC
ACCCATGTGC TCCTCGCGAT GGGACGGCGC CCCAACACGG ACGATCTCGG CCTGGCACAA
GCGGGCATTG CAGTCGACGC CCGCGGCTAC ATCGGCGTGG ACGACCAGCT TCAGACGAAC
GTGCCGGGCA TCTGGGCACT GGGCGATTGC AACGGCCGCG GGGCGTTCAC GCACACGGCC
TACAACGACT TCGAGATCGT CGCGGCCAAC CTTCTGGACG GCGCCGACCG GCGCGTGAGC
CAGCGCCTGC CCGGCTACGC GCTGTACATC GATCCACCGC TCGCGCGGGT CGGAATGACC
GACGCCGAGG CGGCAAAAGA CGGACGGCGA CTCCTGTATT CGAAGCGCTC GATGACCCGG
GTCGGCCGTG CGGTCGAGAA AGGCGAGAGC CAGGGGTTCA TGAAAGTCGT GGCGGATGCC
GACTCCCGCA AGATCCTGGG TGCGGCCATC CTGGGCACAG GCGGCGACGA AGCGATCCAC
GGCATCCTGG ACATGATGCA CGCGGACCAG ACAATCGACA CGCTGCGCTG GGCCGTGCCA
ATCCATCCGA CGGTGTCCGA GTTGATCCCG ACCGTCCTCC TCGATCTGAG CGCCAAAGGT
CCCTGA
 
Protein sequence
MAERAVDAII IGAGQAGPSL AGRLDATGHK VVLIERHLVG GTCVNTGCKP TKTLIASAYA 
AHTARRGSDY GFSVASPVTM DMPAVAARAR KVILDSRRGN EEWLAGMRNV ELIRGHARFV
AEGTVDVNDQ RLTAPKIFIN VGARAQVPDL PGVDEVPFLT NTDMVALETL PRRLVIVGGS
YIGLEFAQMY RRFGAEVTVV ERADRLIARE DPDVSSAVRE ILEAEGIAIR TGAECISFKA
HETGVCVDVD CKEGEPSVTG THVLLAMGRR PNTDDLGLAQ AGIAVDARGY IGVDDQLQTN
VPGIWALGDC NGRGAFTHTA YNDFEIVAAN LLDGADRRVS QRLPGYALYI DPPLARVGMT
DAEAAKDGRR LLYSKRSMTR VGRAVEKGES QGFMKVVADA DSRKILGAAI LGTGGDEAIH
GILDMMHADQ TIDTLRWAVP IHPTVSELIP TVLLDLSAKG P