| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5920 |
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| Symbol | |
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| ID | 7974959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 624438 |
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| End bp | 625373 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796487 |
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| Product | domain of unknown function DUF1738 |
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| Protein accession | YP_002947761 |
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| Protein GI | 239820576 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4227] Antirestriction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGTGC GGCAGGTCGT GACGGACCGG ATCATCGCGA TGCTGGAGAA GGGCGGCAGC
GTGTTCCGCG AACGCTGGAC GCGGGCGGCG GCGCGCGGGG TGCCTCGCAA CGGCAAGACC
GGGGCGCCCT ACCGCGGCGC GAATGTGCTG CTGCTCTGGG AGGCGGCGAT CGAGGCGGGC
TACGCGTCCA ACGTGTGGCT GACCTACCGG CAGGCGCAGA GCCTCGGCGC CCAGGTCCGC
CGGGGCGAGC GCGGCGTGCT GTGCGCGCAC TTCGAGCGCA GGGCGCGGGA GCACCTTGAC
GATGCCGACG ATGTCCTCTC GGATGGCGGC GTGGATGAGG AGCCCCTGAC GGCCCGTTCC
GGTGTGCGCG CGGGCGTGCT GCTGTGCCGG CCGTTCTGGC TCTTCAACCT GGCGCAGATC
GAGGGGTTGC CGCTGGAGGT CGTGGACCGG GGCATCGCCG CGCCGGCGGC TTCGCAGGGT
CCCGTGGAGC GGGCGATGCG GCTGCTCGGG GGCTGCCATG CGACGATCCG GCACGGGTTT
GACCGGGCGG CCTACCTGCC GGCGCTCGAC GAGATCCGTC TGCCGTGGCC GCGGCAGTTC
ACGAGCGCCG AGGCGCTGTG CGCGACCGCG CTGCACGAGC TGGTGCACTG GACCGGCCAT
CCCGAGCGGC TGAACCGCAG CTTCGGGCGG CGTTTCGGCG ATGCGGCCTA TGCGTTCGAG
GAACTGGTGG CGGAGCTCGG CAGCGCGTTC CTCCTGGGGC AGTGCGGGCT GGTCGATGCC
ACGGTCGAGG GGCATGCGGC CTACATCGAC GCCTGGCTGA AGGTGCTGCG GGCCGACCGC
ACGGCGATTT TCACGGCAGC GCGCCTCGCG GAGGAGGCGT TCGCGTACAT CGTGGCGCGG
GAGATGCCTG CCTTTGGGGA GGCCGCGATG GACTGA
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| Protein sequence | MDVRQVVTDR IIAMLEKGGS VFRERWTRAA ARGVPRNGKT GAPYRGANVL LLWEAAIEAG
YASNVWLTYR QAQSLGAQVR RGERGVLCAH FERRAREHLD DADDVLSDGG VDEEPLTARS
GVRAGVLLCR PFWLFNLAQI EGLPLEVVDR GIAAPAASQG PVERAMRLLG GCHATIRHGF
DRAAYLPALD EIRLPWPRQF TSAEALCATA LHELVHWTGH PERLNRSFGR RFGDAAYAFE
ELVAELGSAF LLGQCGLVDA TVEGHAAYID AWLKVLRADR TAIFTAARLA EEAFAYIVAR
EMPAFGEAAM D
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