| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5896 |
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| Symbol | |
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| ID | 7975947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 606748 |
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| End bp | 608910 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796471 |
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| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
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| Protein accession | YP_002947745 |
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| Protein GI | 239820560 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.500767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTT CCTCGCACGA TGTGTCCCGG CGGGTCTTCC TGGTTGCCGG CGGATCGCTC
GCACTTGGCG TCGCATTCAA CGGTGCGGGC GCACGGGCCG CCACCGAGAA GCGCGCTGCG
TTCGAGCCGA ATGCGTTCAT CCGGATCGAT GCCGACGACA CCATCACGCT GACCATGCCC
CGTGTGGAGA TGGGCCAGGG AACCTACACG GCCCTGTCGA TGCTGATCGC CGAAGAACTC
GAGATCCCGC TCGCCCGCGT CAAGCTCGCC CATGCGCCGC CCGATGCGTC CCGTTATGGC
AACCCCCGAG CCGGCGGCGC GCAGATCACC GGGGGCTCGA ACTCCGTTCA GGGTGCTTGG
GAGCCGCTCC GGACGGCAGG CGCCATGGCG CGTGTCATGC TCGTCGAGGC GGCCGCGCAG
GAATGGCGTG TTGCGGCGGC CGAGTGCAGC GCGCACGACG GTGTCGTGAT CCACGCGCCC
AGCGGCCGGC AACTCGCCTA CGGGCAACTG AGCCAGCGGG CGGCCGGCTT GCCGTTGCCG
CAGCAAGTCA CCCTCAAGGC ACCGGAAGCC TTCAAGCTCA TCGGGCGTCC GGTCAAGCGG
CTCGATGCCG CGGAAAAGAT CGATGGTCGC GCGCGTTACG GCATCGACGC GAGGCTGCCG
AAGATGCGCT ATGCCGCTGT TGCGGCAAGC CCTGCTTCAG GCGGCAAGCT GGTGAGCGTG
GACGATCGCG CGGCATTGGC CTTGCCCGGG GTACGCCAGG TGGTGCGCAT CGACAACGCC
GTGGCGGTGA TCGGAGACCA TTCATGGGCT GCAAAGCAGG GACTTGCAGC GTTGAAAGTC
GTCTGGGACG ACGGGCCGGC GGCGAGCATG TCGACGGCCG GGATCCGCAA GAAGCTGGAG
GATGGTCTCG CACGGCAAGA TGGCGCTGTG GCGCGTGCGC AGGGTGATGC CGACGCGGCG
CTGCGCGGCG CGGCCAAGCG GCTCACGGCC ATCTACCATT CGCCGTTTCT CGCCCATGCG
GCGATGGAAC CGATCAACTG CACCGTGGAC CTTCGCGCGG ATGGCTGCGA CGTCTGGGTG
AGCACGCAGG CACCGACACG CGCCCGCGAC CTCGCGGCGC GCGCATCGGG ACTCGCAGCC
GACAAGGTCC GCATCCACAA CCACCTGATA GGCGGCGGAT TCGGGCGCAG GCTCGAAGCC
GACTACGTCG AGCAATCGGT GGCCTTGTCG CGGAACGTAC AAGGGCCGGT CCAGTTCATC
TGGTCGCGAG AAGAAGACAT TCAGCACGAC ATTCTGAGGC CGGCCTATGT CGACCAGCTC
AGTGCGGCGA TCGATGCACA AGGTCGCCCG ACCGCCATCA CGCACCGGGT GGTCGGCTCG
TCGATCATGG CTCGCGTCGC GCCGGGCCTG TTTCGCAATG GACTGGATCA CGACGCGGTC
GAGGCTGGTT TGGGTCCCTA TGAATGGCCC GCTTCCAGGC TGGACTATGT GCGCGAGGAG
CCGGGGGGCG GCATGGTCAC AGGTTGGTGG CGCGGCGTGG GGCCCACGCA CAACTGCTTC
GTGGTGGAAA GCTTCGTGGA CGAACTGGCC TCGATGGCCA ACAAGGATCC CGTGGCCTTC
CGCCTGGCGC TGCTGCCCGA GCGTTCGCGT GCTCGGGCGG TTCTGGAACT GGCGGTCCAG
AAGGCGGGCT GGGATGCGCC CTTGCGCCCC GCGGCGGCGA AAGGCGCCAA GCGTGGCCGC
GGAGTTGCGG TGCTGGCCGC GTTCGGCAGC TACCTGGCCC AGGTGGCCGA GGTGACGGTC
GATGCATCTG GCGACATCGT TGTCGACCGC GTCGTATGTG CGGTGGACTG CGGCATGGTC
GTCAATCCTG ACACGGTCGA GGCGCAGGTG GAAGGGGGCA TCCATTTCGG CGTCAGCGCG
GCCTTGTGGG GCGAGATCAC CATCAAGGCC GGCCGTGTCG AGCAAAGCAA CTTCCATGAC
TATCGGGTCT TGCGGTTGTC GGAGGCGCCG AAGGTGGAGG TCCATATCGT GCCGAGCCGG
GAAGCGCCGG GTGGCATTGG CGAACCCGGT ACGTCGGTTG TGCTGGCAGC TTTGGCGAAC
GCCGTGTCTG CCGCCACCGG TCAACGGCTG CGCAGCCTGC CTCTGCGCTC CAACTCCGCT
TGA
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| Protein sequence | MNASSHDVSR RVFLVAGGSL ALGVAFNGAG ARAATEKRAA FEPNAFIRID ADDTITLTMP
RVEMGQGTYT ALSMLIAEEL EIPLARVKLA HAPPDASRYG NPRAGGAQIT GGSNSVQGAW
EPLRTAGAMA RVMLVEAAAQ EWRVAAAECS AHDGVVIHAP SGRQLAYGQL SQRAAGLPLP
QQVTLKAPEA FKLIGRPVKR LDAAEKIDGR ARYGIDARLP KMRYAAVAAS PASGGKLVSV
DDRAALALPG VRQVVRIDNA VAVIGDHSWA AKQGLAALKV VWDDGPAASM STAGIRKKLE
DGLARQDGAV ARAQGDADAA LRGAAKRLTA IYHSPFLAHA AMEPINCTVD LRADGCDVWV
STQAPTRARD LAARASGLAA DKVRIHNHLI GGGFGRRLEA DYVEQSVALS RNVQGPVQFI
WSREEDIQHD ILRPAYVDQL SAAIDAQGRP TAITHRVVGS SIMARVAPGL FRNGLDHDAV
EAGLGPYEWP ASRLDYVREE PGGGMVTGWW RGVGPTHNCF VVESFVDELA SMANKDPVAF
RLALLPERSR ARAVLELAVQ KAGWDAPLRP AAAKGAKRGR GVAVLAAFGS YLAQVAEVTV
DASGDIVVDR VVCAVDCGMV VNPDTVEAQV EGGIHFGVSA ALWGEITIKA GRVEQSNFHD
YRVLRLSEAP KVEVHIVPSR EAPGGIGEPG TSVVLAALAN AVSAATGQRL RSLPLRSNSA
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