Gene Vapar_5879 details

Gene Information

• Locus tag: Vapar_5879
• ID: 7975930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 590363
• End bp: 590968
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644796455
• Product: Glutathione S-transferase domain protein
• Protein accession: YP_002947729
• Protein GI: 239820544
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0625] Glutathione S-transferase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTCC ATTGGTCCCC CAAGTCACCG TTCGTCCGCA AAGTCATGGT CTGCGCCCAT 
GAGTTGGACA TCGCCGGCCA GCTCACGCTG GTTCGCTCGG TGGCGGCCAT GCTCAAACCC 
AATCCTCAAC TCATGGCGGA CAACCCTTTG TCCAAGATTC CGACGCTGAT GCTGGACGAC 
GGCCGCACGT TGTTCGATTC GGTCGTCATC TGCGAGTACC TCGACCATTT GGCCGGCGGT 
AGCCTTTTTC CGCGCGAAGG CGACGCACGC TGGCGGGCGC TGCGCTGGCA TGCGCTGGGC 
AACGGCCTGC TGGATGTGCT GATCCTTTGG CGCAACGAGC GTGAGCGCGA GGTGCCATTG 
GGCGCACTGC AGGACGCCTT CGCGCTCAAG ACCAAGGCCA GCCTGATGCT GCTGGAGCAG 
GAAGTGGAGA TGCTTGCCAA GGCCCCGCTG TCCATTGGTC ACGTCGCTAT CGGTTGCGCG 
CTGGGCTATA CCGACTACCG GTTCGCAAGC TTGGAATGGC GCAGCCGCGC GCCCCAGCTG 
ACTCACTGGT TCGCCGAACT TTCGAAGCGG CCATCTTTCG TGGCGACCGA GGTGGCAGAA 
GGCTAA 

 

Protein sequence

MKLHWSPKSP FVRKVMVCAH ELDIAGQLTL VRSVAAMLKP NPQLMADNPL SKIPTLMLDD 
GRTLFDSVVI CEYLDHLAGG SLFPREGDAR WRALRWHALG NGLLDVLILW RNEREREVPL 
GALQDAFALK TKASLMLLEQ EVEMLAKAPL SIGHVAIGCA LGYTDYRFAS LEWRSRAPQL 
THWFAELSKR PSFVATEVAE G