| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5878 |
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| Symbol | |
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| ID | 7975929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 589331 |
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| End bp | 590314 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796454 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947728 |
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| Protein GI | 239820543 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCA AGACCTTCCT GTCCAGCCTG ATGCTGGCTT CACTGGCACT GACGAGCGCT
CATGCCGGTG ACGGCCCCGG CGGCTACCCG GACAAGCCGG TCCGGCTGAT CGTGCCCTTC
CTGGCGGGCG GAGCCACCGA CCTGATGGCC CGCGGCATGG CGCAGAAGCT GTCCGAGGCC
ATCGGCCAGC CGGTGGTAAT CGACAACCGC GCGGGCGCTG GTGGCAGCAT CGGTGCCGAG
GCCGCTGCCG CCGCACCAAA GGACGGCCAT ACCCTGCTGT ATTCAACGAT GGGCGTGCTC
ACCATCAACC CCAGCCTCTA CCGCAACCCG AAGTACGACC CGGCCACCAG CTTCAGCCCG
GTCGCGCTGA CTCACGTCAC ATCCAACCTG CTGGTGGTCA ACCCGCAAGT GGGCGCGAAG
TCCGTCGCCG AACTCGTGGC GCTGGCGCGC AGCAAACCGG GCACGCTGAG CTTCAGCTCG
GCGGGCAACG GCACCAGCAG CCACCTGTCA GGCGAACTGT TCATGTCGGT CGCCAAAGTC
GACCTTCTGC ATGTTCCCTA CAAGGGCACG GCCGCCGGGC TGCCGGACCT GCTGTCCGGC
CGTATCGAGA TGACCTTCGA CACCGCGTCC AATTTCGTCG ATCACATCAA GGCCGGCAAA
CTGCGGCCGC TGGCCGTCAC CTCGCGCAAG CGCCTGGACA CGATGCCCGA AGTGCCCGCC
ATGGCCGAAA CTCCGGGCTT CACCGACTAC GACGTGTCGC TGTGGCTGGG CGTGCTGGTG
CCAGCCGGTA CCTCGCCCGA GATCGTGCGC TACCTCAATC GACGTCTGGT CACGGTGATG
CGCGAGCCGG CCATGGCAGC CTCGCTCAAG CCCCTGGGCA TCCAGCCGCT GTACAGCAGC
CCTGAAGAAT TCGCCAAGGT CATCGACCAG GACCGCCGTA AGTGGTCTGC GGTTGTCAAG
GCGGTCAAGG TTCAGCTCGA ATAA
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| Protein sequence | MQRKTFLSSL MLASLALTSA HAGDGPGGYP DKPVRLIVPF LAGGATDLMA RGMAQKLSEA
IGQPVVIDNR AGAGGSIGAE AAAAAPKDGH TLLYSTMGVL TINPSLYRNP KYDPATSFSP
VALTHVTSNL LVVNPQVGAK SVAELVALAR SKPGTLSFSS AGNGTSSHLS GELFMSVAKV
DLLHVPYKGT AAGLPDLLSG RIEMTFDTAS NFVDHIKAGK LRPLAVTSRK RLDTMPEVPA
MAETPGFTDY DVSLWLGVLV PAGTSPEIVR YLNRRLVTVM REPAMAASLK PLGIQPLYSS
PEEFAKVIDQ DRRKWSAVVK AVKVQLE
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