Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5873 |
Symbol | |
ID | 7975924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 581984 |
End bp | 583189 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644796449 |
Product | acetyl-CoA acetyltransferase |
Protein accession | YP_002947723 |
Protein GI | 239820538 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAGG CCTTTGTTTA CGACGCCGTT CGCACTCCGC GCGGCAAGGG CAAGACCGAC GGCTCGCTGC ACGAGGTCAA GCCGATCACA CTAGCTGTCG GATTGCTGCG GGCCTTGCAG CAGCGCACCA GCCTGGACAC GGCTCGCGTG GACGATGTGG TCATGGGCAT CGTGACACCC GTAGGAGACC AGGGGGGCTG TCTGCCGAAG ATCGCGGCGC TTGCGGCGGG CTGGGACTGG AACGCCAGTG GCATCCAGAT CAACCGCTTC TGCGCTTCCG GCCTGGATGC CATCAACCAA GCCGCGCAGC GCGTGCGCTC GGGATGGGAT GACTTGATCG TCGCGGGAGG CATCGAAAGC ATGAGTCGGG TGCCCATGGG CAGCGATGGA ACAGCGTGGG CGCTGGACCC GCGCACGAGC ATCGACAACG CTTTTGTGCC GCAAGGTATC TCCGCCGACC TTATTGCATC GACTGAGGGA TTCACCCGTG AGGACGTGGA TGCCTATGCA CTTGCTTCGC AGCAACGCGC CGCAAGGGCG CTGGCCGAAG GACGCTTCGC ACGCAGCGTC GTACCCATTC GCGATGGCAA CGGCTTGATG ATCCTGGACC ACGATGAATT CGTGCGGCCT GACAGCACGA TGGCTGGCTT GGCGGCGCTC AAGCCTTCGT TCGAGCAGGC CGGCCATATG GGCTTCGACG CCGTCGCGCT GCGCCGCTAT CCGCAGCTCG ACCGCGTCCG GCACGTACAC ACCCCAGGGA ACAGTTCGGG CGTCGTGGAT GGCGCCGCTG CGGTGTTGGT CGGCAATGAG CGTGTGGGCG CTGCGCTGGG ATGGACGCCG CGCGCGCGCG TCGTGGCAGT TGCGCTCACC GGCAGTGAAC CGACCCTCAT GTTGACCGGT CCGGTGCCAG CCGCGCGCAA AGCGCTGCAG CGCGCCGGCC TCACGGTCGA CCAGATCGAC CTGTTCGAAG TCAACGAGGC GTTTGCGAGC GTACCCCTGC ATTTCATGAA GCACATGAAG GTGCCGCACG AGAAGGTCAA CGTCAACGGT GGTGCGATCG CATTGGGGCA CCCGCTGGGC GCTACCGGCG CGATCCTCGT CACCACACTG TTAGATGAGC TGGAACGGCG CCAGCTGCGC TATGGACTGG TCACGCTGTG CGTCGGCGCC GGCATGGGCA TCGCCTCCAT CTTCGAACGG ATCTGA
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Protein sequence | MNEAFVYDAV RTPRGKGKTD GSLHEVKPIT LAVGLLRALQ QRTSLDTARV DDVVMGIVTP VGDQGGCLPK IAALAAGWDW NASGIQINRF CASGLDAINQ AAQRVRSGWD DLIVAGGIES MSRVPMGSDG TAWALDPRTS IDNAFVPQGI SADLIASTEG FTREDVDAYA LASQQRAARA LAEGRFARSV VPIRDGNGLM ILDHDEFVRP DSTMAGLAAL KPSFEQAGHM GFDAVALRRY PQLDRVRHVH TPGNSSGVVD GAAAVLVGNE RVGAALGWTP RARVVAVALT GSEPTLMLTG PVPAARKALQ RAGLTVDQID LFEVNEAFAS VPLHFMKHMK VPHEKVNVNG GAIALGHPLG ATGAILVTTL LDELERRQLR YGLVTLCVGA GMGIASIFER I
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