| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5866 |
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| Symbol | |
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| ID | 7975917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 575521 |
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| End bp | 576438 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644796443 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947717 |
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| Protein GI | 239820532 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTGA CCCGATTTAC GTTGCGCCAG TTGGAGGCTT TCACGTCGGT CGCCGAGATG
CGCAGTTTCA GCACAGCGGC AGGCCAAATG GGACTGACAG TTCAAGCTGT GAGCCAGCTG
GTTGCAGAGC TCGAGGCGAC TGTGGGTTTC AGGCTGTTGG AGCGCACCAC GAGGCGCGTG
GAACTCAGCA GCGCGGGGCG GGACTATCTC GCCTCGGCCA AGACCGTGCT GCGCCACGTG
GGAGACGCAG AGATGGCGGC CAACGATGTC CGGAACCGCG CGTCTGGGCT GGTACGGGTG
GGCGCTCCGC TGGTGCTCGC TTCCATGGCA CTGCCGCAGG CAATCTCCCG ATATTCCCGT
GATCGGCCGA AGGTTGTCGT TCGCATTCGG GACGTGGCTG TGGATCGTCT GGTGGACGCC
GTCTCTTCCG GTGACGTCGA CATCGCCGTC GGTCCTGATC GCGCACTTGG CGGCGCCGTG
GCGGCTCAGA CGCTGTTTGA CAGTCCCTGG GTGCTTTGGT GCGCACCGTC GCACCCCTTG
GCATCGCGCA AGCGCGTTCG CTGGGCCGAT CTGCGCAATG TTCCTCTGGT CGTTACGGGA
AGAGATCACG AATTGGGCGT GGAACGCATG CGGCTGAACG CACCTGACGA AGAGCGTGTA
ACACCAGTCG AAATTGTCGA TAACACCACC ACGGCATTTG GTATTTCGGC GCAGGGCTTT
GCCGCCACAC TGGCCCCCGA CTACGTCGGC GTGCTGGCGA CAGCATTCGG ACTGGTCATG
CTGCGTGTGG TCGAACCAGA GACAGTGCGC AAGGTATGTC TGTATCGGCC TCTTGGAAGG
TCGCTCTCGC CGGCGGCGCA GGACTTCGCA GATTTTTTGG CGATGGAGTT GAAGCAGCAG
AACGTTGCCA GCTCCTAG
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| Protein sequence | MPLTRFTLRQ LEAFTSVAEM RSFSTAAGQM GLTVQAVSQL VAELEATVGF RLLERTTRRV
ELSSAGRDYL ASAKTVLRHV GDAEMAANDV RNRASGLVRV GAPLVLASMA LPQAISRYSR
DRPKVVVRIR DVAVDRLVDA VSSGDVDIAV GPDRALGGAV AAQTLFDSPW VLWCAPSHPL
ASRKRVRWAD LRNVPLVVTG RDHELGVERM RLNAPDEERV TPVEIVDNTT TAFGISAQGF
AATLAPDYVG VLATAFGLVM LRVVEPETVR KVCLYRPLGR SLSPAAQDFA DFLAMELKQQ
NVASS
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