| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5846 |
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| Symbol | |
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| ID | 7975897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 559589 |
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| End bp | 560341 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796425 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947699 |
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| Protein GI | 239820514 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACAG CCATCTGCTC TCTCGACCCG ATGGTCTCGG TCGCGGGGCT GTCCAAGCAT
TTCCACGCGC ACCAGGTGCT CAGCGACGTC CATCTGAGCG TCGCCGCCGG CGAGCGCGTG
GTCGTGTGCG GCCCCTCGGG TTCGGGCAAG TCGACGCTCG CGCGGTGCAT CAGCGGACTC
GAGGGCTACG GAAGCGGCAC CGTGACGGTC AACGGCGTCG CGGTCTCGCC GCGCATGCGC
CATGCCGATC TGGTACGCGC CAACATCGGC ATGGTGTTCC AGCAGTTCAA CCTGTTTCCG
CACCTCACCG TGCTCGAGAA CTGCACCCTG GCACAGCGCT GGGTCCGGCA CCGCTCACGG
CAGGAGGCCC GGCAGACCGC ACTCGCGTAC CTCGACAAGG TCCGGCTCGC CGAGAAGGCA
TCGGCCTATC CGGCCCAGCT CTCGGGCGGA CAGCAGCAGC GCGTCGCCAT CGCGCGGGCC
CTCTGCCTGA ATCCTTCCGT CATGCTGTTC GACGAGGCCA CGTCGGCACT CGATCCGGAG
ATGGTCAAGG AAGTGCTCGA AACCATGATC CTGCTGGCGC GGGACGGCAT GACGATGATC
TGCATCACCC ACGAAATGGG CTTCGCGCGG GCGGTCGCCG ACAAGGTCGC GTTCATGGAC
GGCGGGCGCA TCGTGCAGGC CGCGCCGCCC GGCGAGTTCT TCGGCAACTG CGCGGACCCG
CGCATCCAGC GATTCCTCAG CAAGGTCTTC TGA
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| Protein sequence | MGTAICSLDP MVSVAGLSKH FHAHQVLSDV HLSVAAGERV VVCGPSGSGK STLARCISGL
EGYGSGTVTV NGVAVSPRMR HADLVRANIG MVFQQFNLFP HLTVLENCTL AQRWVRHRSR
QEARQTALAY LDKVRLAEKA SAYPAQLSGG QQQRVAIARA LCLNPSVMLF DEATSALDPE
MVKEVLETMI LLARDGMTMI CITHEMGFAR AVADKVAFMD GGRIVQAAPP GEFFGNCADP
RIQRFLSKVF
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