| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5836 |
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| Symbol | |
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| ID | 7975887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 540904 |
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| End bp | 541893 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644796415 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947689 |
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| Protein GI | 239820504 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTAC AGATATTAGC GCCGACAGCG GGCAAGGACT ACCCCCAGAC CTGGAATGAA
TTCCTGGACT GGTTTTCCAC GGAGGATGAC TGTCTCGCCT ACCTGGAGCG GCTGCGCTGG
GGCGCTGGGT TCGTCTGCCC GAAGTGCGGC AGCATTGGCG AGGCGTACCG TGCCAGCCGC
ACCCGCCTGA TGTGCCGCAG CTGCCAGCAC CAGACCACGG TGACTGCCGG TACGATCTTC
GACAAGACCC GCACGCCACT GCGTGTGTGG CTGGCCGCGG CTTGGTATCT GACCAACCAG
AAGCAAGGCG TCAGTGCCTT GGGCCTGCAG CGTGTGCTGG GCCTGGGCAG CTACCAGACC
GCCTGGACCA TGCTGCACCG TTTGCGCCGC GCTATGGTGC GGCCCGAGCG GGATCGGCTC
AAGGGCACGG TCGAGGTTGA TGAGACCTAT CTGGCGCTGA GCGACCGCGA GAATCCGATT
TCTCCCCAGG GGCGCAAGAA CAGTACCTCT CAGGTGCTCG TCGTCCTGGC TGTGGAGGTG
CTGGAGCCCA AGGGATTCGG CCGGATCCGC CTGCGCCGCA TCCCCAAGGA CTCCGCCACC
CATGTGATCC CATTTGTGCA GGAGAACGTT GAGCCAGGCG CCCAGGTGCG CACCGATGGC
TCTGCGGCCT ATCGTTCACT GAAGGATCTC GGCTATGAGC ACAAGCGCAC GGTGGTGCTC
GGCTCGCAGG TGCCGGCCCA TGTGTCGATG GCCGGCGTCC ACCGCGTGGC CGCACTGATC
AAGCGCTGGA TTCTGGGTAC GCATCATGGC TCGGTGCAGC CCGAACATCT GGACGCCTAT
CTCGATGAGT TCGTCTTCCG CTTCAACCGT CGCACCTCAA GCTCGCGCGG CATGTTGTTC
TACCGACTCT TGCAGCAGGC CGTGGTCACC CCACCGGTGA CCTATCAGCA GGTGATTCAG
GCGGGTGCAA AACAGCGCCG AAAAGGATAG
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| Protein sequence | MDVQILAPTA GKDYPQTWNE FLDWFSTEDD CLAYLERLRW GAGFVCPKCG SIGEAYRASR
TRLMCRSCQH QTTVTAGTIF DKTRTPLRVW LAAAWYLTNQ KQGVSALGLQ RVLGLGSYQT
AWTMLHRLRR AMVRPERDRL KGTVEVDETY LALSDRENPI SPQGRKNSTS QVLVVLAVEV
LEPKGFGRIR LRRIPKDSAT HVIPFVQENV EPGAQVRTDG SAAYRSLKDL GYEHKRTVVL
GSQVPAHVSM AGVHRVAALI KRWILGTHHG SVQPEHLDAY LDEFVFRFNR RTSSSRGMLF
YRLLQQAVVT PPVTYQQVIQ AGAKQRRKG
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