| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5833 |
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| Symbol | |
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| ID | 7975884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 537487 |
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| End bp | 538008 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644796412 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_002947686 |
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| Protein GI | 239820501 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGCCG ATGTGTCAGG CGGCGAGCTG GCCAAGACCT CGGGGATTTC TGCCTCGATG
CTGTCACGCA TCGAGCGCGG TCTGGTCTCG CCGTCGGTGG AGACGTTGGA GCGCCTCGCT
CAGGGCCTGC ATGTGCCGAC CTCCCGCTTC TTCAGTGATC AGGCGAGGCG CACCGACTTC
TGCCATGTGC GCGCAGGACA TGGTGTCCTG GTCGATCGCA TCGGCGCGGT GGCGGACTAC
CGCTATGAGC TGCTGGGCCA CCTGCTGTCG GGCAACCTGT TCGTCGAGCC CTACCTGGTC
ACATTGCTGC CCGGCGCCGA TCCGTATGTG ACCTTCCAGC ATCCGGGTCT GAAGTTCCTG
TACTTCCTGT CCGGAGAGGT CATGTACCGC TACGGCGGCA AGTCGGTGGC GGTAGGGGCG
GGGGACTCGC TGCTGTTCGA TGCGACCGCA CTCCATGGGA TCGAGGCCAT TCAGACCCAG
CCGGTCTCTT ACCTGTCGGT GGTTTTCACG CTGCGGGAGT AG
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| Protein sequence | MAADVSGGEL AKTSGISASM LSRIERGLVS PSVETLERLA QGLHVPTSRF FSDQARRTDF
CHVRAGHGVL VDRIGAVADY RYELLGHLLS GNLFVEPYLV TLLPGADPYV TFQHPGLKFL
YFLSGEVMYR YGGKSVAVGA GDSLLFDATA LHGIEAIQTQ PVSYLSVVFT LRE
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