Gene Vapar_5829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5829 
Symbol 
ID7975880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp535343 
End bp535630 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content60% 
IMG OID644796410 
Productaddiction module toxin, RelE/StbE family 
Protein accessionYP_002947684 
Protein GI239820499 
COG category[R] General function prediction only 
COG ID[COG3668] Plasmid stabilization system protein 
TIGRFAM ID[TIGR02385] addiction module toxin, RelE/StbE family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCGAAC TTGAATGGCG CGAAGCGGCG CGCGTGGATC TGCTGTCCAT CGTTGAGTAC 
ATCGCGCAGG ACAACCTCGA TGCGGCACTG GCACTCGTCA CGGAGATCGA GGAAAAGGCC
GAACAGTTGA GGGAGCAGCC TAAACTTTAT CGGCCGGGGC GAGTCCGCGG GACACGCGAG
ATGGTGGTAC GGCCAAACTA CGTGGTCGTG TATTCGGAAT CAATGATTGC CGTGACGATT
CTGCGTGTCT TGCACGCTGC ACAGATGTGG CCGCCCGCAC GCCCCTGA
 
Protein sequence
MLELEWREAA RVDLLSIVEY IAQDNLDAAL ALVTEIEEKA EQLREQPKLY RPGRVRGTRE 
MVVRPNYVVV YSESMIAVTI LRVLHAAQMW PPARP