| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5824 |
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| Symbol | |
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| ID | 7975875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 530787 |
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| End bp | 531995 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796405 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947679 |
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| Protein GI | 239820494 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.41273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACAG ACAGTTCTTC CGGAAGCCAA GCGCCGAACG GGATCGAGAG CACCGAACCT
TGGTATGGCG TGGGCTCCAT CCAGGGAGAT GCGCCTGCTG CGGGCCGCGG TCATACCCGT
GTGCCCGATG CCATCGAGCG CCGCTACCTG CGCATCGACA ATCGTTACTT CTTCCCGGAC
CGCACCCTCG CGTTCATCGA CGACGGCGGC CGTCTCCGCG TGCGAACCGA GAACCGCGAG
GTGCTGCACA GCGTCGTGGC GATCGCCGAA ACGCGCGGCT GGCGGGTCAT CGAACTCACA
GGCACCGAGA CCTTCCGCCA GGGCATGTGG CACGAAGCCG CGCTGCGAGG CATCGAGGCC
CGAGGCTACG AACCGACTCC GACTGAAATC CTCCACGTCC AGCGTGCGTT GAAGAAACGA
GGCCCGCCGT CGCACGAGAA TGGACGGCGT CCGATACCTG CGTCGCTGGA CCGCGAAGCA
ACAACCGTGC ACCACAGCGC CGTACCCGCC GAAGCCGATC CCAGTGCCAG TCTTCGTCCG
CACAAGGACG AACCGCAAGA CCGCCGATTC GAACGGGGAG GACCAAGATC GCCAGTCAGG
GGGATGTTCG TGGCGGCCGC TGCCGCACCC TATCAATTCG ATCCAACGCA GCGCATGTCC
TTCTACGTGA CCGTTCGCGT GGAGACCGGG GCTCGCACCA TTTGGGGTAC GGACCTCGAG
AGGGCCCTCG CAGAGTCGAC CTCGCAACCG CGCATCGGCG ACCAAGTGGT GCTCACGCAG
CACGGCACCC GTCCGGTCAA CGTCCGGGTG GCGACCCGCA ATGCGGAAGG CGAGCTGGTC
GGCGAAAAGA AAATTGTCGC GCAGCGTGCG CACTGGAGCA TCGAGACATC CGATCACCTT
CGCGCGATGG AACACCACGC CATGCGCATA CGCACCGGGA AATTGCTGTC CGATGCGGCC
CAGGGTCCGC ACCCCGAACT GGCCACGGCG GCAGCGGATC TCAAGTTGGC CGAGCAGTAC
GCACAGCGTG TGACCAGCGA TCCGTCCTCC CAGCAGCACC TCGTACAGCT GATTCGCGAT
CGGATCGCCG AGGCGCTGGC GCAAGGCCGC GCCATCCACC TTCCGGATCG ACTCCCGCGC
GTCGCTCGCA TGCATGCGCG CCAACGCACG GCCAGAAGCC AGGAGGATTT GAGCCGCGAG
CGCGTCTAG
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| Protein sequence | MSTDSSSGSQ APNGIESTEP WYGVGSIQGD APAAGRGHTR VPDAIERRYL RIDNRYFFPD
RTLAFIDDGG RLRVRTENRE VLHSVVAIAE TRGWRVIELT GTETFRQGMW HEAALRGIEA
RGYEPTPTEI LHVQRALKKR GPPSHENGRR PIPASLDREA TTVHHSAVPA EADPSASLRP
HKDEPQDRRF ERGGPRSPVR GMFVAAAAAP YQFDPTQRMS FYVTVRVETG ARTIWGTDLE
RALAESTSQP RIGDQVVLTQ HGTRPVNVRV ATRNAEGELV GEKKIVAQRA HWSIETSDHL
RAMEHHAMRI RTGKLLSDAA QGPHPELATA AADLKLAEQY AQRVTSDPSS QQHLVQLIRD
RIAEALAQGR AIHLPDRLPR VARMHARQRT ARSQEDLSRE RV
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