| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5807 |
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| Symbol | |
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| ID | 7974928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 513105 |
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| End bp | 513968 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796388 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002947662 |
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| Protein GI | 239820477 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0384253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGCG CACCGGCCAA CCGCCGCGGA ATCCTGCTCA TGCTGGTGGC CATGGGCTGC
TACGTGCTCA ACGATGTCTT CGTGAAGCTG ACAGCACAGA GCCTCCCGCC CGGCCAGGTC
CTGGCCGTGC GCGGCGCCTT CGCCACCCTC TTTGTCCTGG CCCTCGCCCG CGGGACGCGC
GCTGGCTGGC GCACGGCATT GCGGCCGATC GTCGGCGTGC GATGCGGGCT CGAGATCACG
ACCGCCCTCA GCTCCGTCGT CGCCCTGTCG CTCGCGCCGC TCGCCACGGT CAGCACGCTC
ATGATGACCG CGCCGCTGAT GATTGCCGCC ACTGCAATGG CGCTGCGATG GGAGCCTTGG
CACGGAGGCC GGCTGCTCGC CACCGTGGCG GGATTCGCCG GCGTCCTGCT GGTGATCCAG
CCGTCTGCGC GGTCCGAGGT CCCTGCGGCC GGCCTCGCCT GCGCATTGCT ATGTGCCGCT
TCGCTGGCCG CGCGCGACCT GGTGACGCGG CGCATTCCCG CCACGGTCCC GTCGTCGGTC
ATCGCCGTGG CGACCACGCT CGCCGTATGT CTGGCAGGCC TGCTGCTGGG GCTCGTGGAA
CGCTGGGCGC CGCTCACGCG CCACGAGCTC GGCATGCTCG CGGCAGCGGC GGGTTGTGCG
GCACTGGGCA ACTACGCGCT CATCGTGGCC TGCCGCGGCG TCGATCTCTC GGTCGTCACG
CCCTTTCGCT ACAGCCTGAT CCTCTGGGCG TTGCTGTTGG GATACGCGAT CTGGGGCGAC
ATGCCGCGCC TCGAAGCCGC CGCCGGCGTG GTCCTGATTG TCGCGGCCGG TGCCTTCACC
ATCCGGGCGG CGCGCCGTCC GTGA
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| Protein sequence | MASAPANRRG ILLMLVAMGC YVLNDVFVKL TAQSLPPGQV LAVRGAFATL FVLALARGTR
AGWRTALRPI VGVRCGLEIT TALSSVVALS LAPLATVSTL MMTAPLMIAA TAMALRWEPW
HGGRLLATVA GFAGVLLVIQ PSARSEVPAA GLACALLCAA SLAARDLVTR RIPATVPSSV
IAVATTLAVC LAGLLLGLVE RWAPLTRHEL GMLAAAAGCA ALGNYALIVA CRGVDLSVVT
PFRYSLILWA LLLGYAIWGD MPRLEAAAGV VLIVAAGAFT IRAARRP
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