Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5806 |
Symbol | |
ID | 7974927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 510914 |
End bp | 513112 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644796387 |
Product | para-aminobenzoate synthase, subunit I |
Protein accession | YP_002947661 |
Protein GI | 239820476 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
TIGRFAM ID | [TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade [TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00431194 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCACGC TGTTGATCGA CAACTACGAC TCGTTCACCT ACAACCTCTA CCAGTACCTG GCGGCCTGCA ACGGCGAGGC CCCGATCGTG CTGCGCAACA ACGAGATGCA CTGGGACGAG GTCGAGCGCA TGCACTTCGA CAACATCGTG ATCTCGCCGG GCCCCGGACG TCCGCAGCGG CGCGCCGACC TCGGCATCTC GGCGGACGCA CTGCAGCGTT CGCGCAAACC CGTGCTCGGT GTGTGCCTGG GCCACCAGGC CATCGCCCAC CATTGCGGCG CCCGTGTCGA CCTGGCGGTG CGCCCGATGC ACGGACGCCT GGACCGCATC TCGCACGCGC AGCGCGATCT CTTCGCCGGC ATCCCGGACC GCTTCGAGGC GGTGCGCTAC CACTCGCTCG CAGTCACGCA GCTGCCCTCA TCCCTGGAGC CGCTCGCCTG GACGTCCGAC GGCACATTGA TGGGACTGCG TCACGTCTCC CTGCCCTGGT GGGGGGTGCA GTTCCATCCG GAGTCGATCT GCACCGAATT CGGCGCACGG CTGCTGCGCA ACTTCAGGGA CCTGACGCTG GAGTGGCTCG CACAGACGCC CCGGCGCGAG GCACGGGATC GCTTCGGACC CGCGCTGCGT TTCGAAGGCC CGCAGGCGTT GTCGCTGCAC GCGGAGTGCA TCGACACCGC AGCCGATGCC GAGGCCGTGT TCATGCGCAC GTTCGCACAG CGCGACTGCG TTTTCTGGCT GGACAGCAGC CTCGCCGAGC CCGGGCGGGC GCGCTTTTCC TTCATGGGCG ACGCGAGCGG CCCGCGTGCC CAGGTGCTGA ACTACCGCAC CGCCCCGCGC GAACTGATGG TGCGCCGGGG CGACGTCGTC CAGGTGCGCG ACGAGAGCAT CTTCGACTAC CTGCGCGACC ACCTGCCGGG CCAGCCGCCT GCGGGTCCCC CGCTCCCCTT CGACTTCGCG TGCGGCTTCG TGGGCTACTT CGGCTATGAG CTCAAGCGGG AGCTGGACGG CACGCATGCC CACGACGCAG ACACCCCGGA CGCGATGTGG ATCCTCGCCG ATCGCTTCCT CGCCTTCGAT CACGCCGAGC AACAGGTCTG GATCGTCTGC TTGGATGAGG CCGTGCCGTC CAATGAGAAT CGCCGCTGGA TGCAGACCAT GCGCGCGCGG CTGGCAGGCG CACCGGCGAC CGCGCCGGAC GACAGCGCGG CCGCGGCCCG CGATCTGCAA CCATTGGCCT GGCGGATCGA CCTCGCGATC TACCGGGAGC TGATCCTGCG CTGCCAGCAC GAGATCCTGC AGGGCGAGAC CTACGAGGTC TGCCTCACGA ACCAACTGGT CGGCGAAGGG CGCGTCCATC CGCTGGAGAT CTACCGGATC CTGCGCAGGC ACAACCCTGC CCCCTATGCG GCCTACCTGC GCATCGGCGG CTATGCCGTG CTGTGCGCCT CGCCCGAACT CTTCCTGCAC ATCTCCAGCG CCGGCGATGT GGAATCGAAG CCCATCAAGG GCACCGCGGC GCGCGGCGCG ACGCCGGCCG AGGACCAGGC GATCGCGGAC GCCATGGTCG CCGACGAGAA GACCCGCGCG GAGAACCTGA TGATCGTCGA CTTGCTGCGC AACGACCTCA ACCGGGTCTG CGAGATCGAC AGCGTTCACG TGCCGAGCCT GTTCGCGGTC GAGACCTATG CCACCGTGCA CCAGCTGGTC AGCACGATCC GGGGGCGGCT GCGCGCGGAC CTCGGAGCGG TCGACTGCAT CCGCGCCGCG TTCCCCGGCG GCTCCATGAC GGGTGCGCCG AAGGTGCGCA CGATGAAGAT CCTGGACGAA CTCGAGGCGG CGGCCCGCGG CATCTACTCG GGCAGCATCG GCTACCTATC GCTCAACGGC GCGGCGCAGC TCAACATCGT GATCCGCACC CTGGTGTCGG CCAACGGCCG CGTCTCCATC GGCGCCGGTG GCGCCATCGT CGCCATGTCC GATCCTGACG CCGAGGTCGA GGAGATCGTT CTGAAGGCGC AGGCGCTGTG GGACGTCCTC AGGCGTTGCG GCGCACCATT CGGGGCGCGG CCGGGGACGG CGCCGGATGC CCGTGCCGCG GGCGATCCCG GGGTTCCGGG GCCTCCGGGG TCGCCGTCCG CGCCCGAGAT TCCGCAAAGC CCTTCTACGC GGTCACCGCC TGCGTCCGGC AATGGCTAG
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Protein sequence | MRTLLIDNYD SFTYNLYQYL AACNGEAPIV LRNNEMHWDE VERMHFDNIV ISPGPGRPQR RADLGISADA LQRSRKPVLG VCLGHQAIAH HCGARVDLAV RPMHGRLDRI SHAQRDLFAG IPDRFEAVRY HSLAVTQLPS SLEPLAWTSD GTLMGLRHVS LPWWGVQFHP ESICTEFGAR LLRNFRDLTL EWLAQTPRRE ARDRFGPALR FEGPQALSLH AECIDTAADA EAVFMRTFAQ RDCVFWLDSS LAEPGRARFS FMGDASGPRA QVLNYRTAPR ELMVRRGDVV QVRDESIFDY LRDHLPGQPP AGPPLPFDFA CGFVGYFGYE LKRELDGTHA HDADTPDAMW ILADRFLAFD HAEQQVWIVC LDEAVPSNEN RRWMQTMRAR LAGAPATAPD DSAAAARDLQ PLAWRIDLAI YRELILRCQH EILQGETYEV CLTNQLVGEG RVHPLEIYRI LRRHNPAPYA AYLRIGGYAV LCASPELFLH ISSAGDVESK PIKGTAARGA TPAEDQAIAD AMVADEKTRA ENLMIVDLLR NDLNRVCEID SVHVPSLFAV ETYATVHQLV STIRGRLRAD LGAVDCIRAA FPGGSMTGAP KVRTMKILDE LEAAARGIYS GSIGYLSLNG AAQLNIVIRT LVSANGRVSI GAGGAIVAMS DPDAEVEEIV LKAQALWDVL RRCGAPFGAR PGTAPDARAA GDPGVPGPPG SPSAPEIPQS PSTRSPPASG NG
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