| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5801 |
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| Symbol | |
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| ID | 7974922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 503942 |
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| End bp | 504934 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796382 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947656 |
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| Protein GI | 239820471 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.744071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTCC GATCGCTTCC TCCCAAACTC CTCCTGCCGT GGCTCGTCGC CGGCACCGCC
TGGCTGTGCG CCGCCCATGC GTTCGCGGCC GATCCCTTTC CGTCGAAGCC GGTGAAGATC
CTGGTCGGCT TCTCGCCCGG CGGCTCCAAC GACGTCGTGG CACGCCTGAT CGCACCGAAG
CTGGCCGAGG GGCTCGGCGC GCAAGTGCTG GTCGACAACC GGCCCGGCGC CGGCGGCAAC
ATCGCGGTCT CGGCCATGCT CACGGCGCCT GCGGACGGAC ACACCCTGCT GATGTGCACC
ACCGGAACCC TGTCGATCCA GCCGCACGTT CTGAAAAGCA TGCCCTTCGA CCCCGAGAAG
GACATCGTGC CGGTCACGCA GGTCACCAAC GCGCCCTACA TGCTGATGGT CAACTCGACG
CTGCCGGTGA CCAGCGTCAA GGAGCTCGTC GCCTACGCCA GGCAGAAGCC GGGCGAACTC
AACTTCGCTT CTTCCGGAAC CGCAACGGGC GGCCACCTGG CGGGCGAGAT GCTGAAAACG
CGCGCGGGCA TCGACATCGT TCACGTGGCC TACAAGGGAA CCGGCCAGGC GATGACGGAC
CTGCTGGCGG GTCAGGTCTC GATGATCTTC GACCAGCCCG TGAGCTCGAT GCAGTACGCG
CGTTCGGGCA AGCTGCGCGC GCTGGCGGTG GCCAGTTCGC GCCGGCTGGC GGCGTTCCCC
GATATTCCGA CCGTGACGGA AGCCGGCATT CCCGACTTCG AACCCGTGAC CTGGGCGGGC
ATCTGTGCGG CCAAAAATAC GCCGCCCGCC GTCGTCGAGC GCATCCAGCG CGAAGTCGCC
AAGGTGCTCG CGATGCCCGA GATCGCCAAG CGGCTCGCCG CCGACGGCCT GGAACCCGTG
GGCAGCACGC CCGAGCAGTT CCGTGCGTTC CTGGCCGCCG ACAAGCGCAA GTGGGGCCGC
GTGGTGAAGG ACGCCGACGT CAAGGCCGAA TGA
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| Protein sequence | MNVRSLPPKL LLPWLVAGTA WLCAAHAFAA DPFPSKPVKI LVGFSPGGSN DVVARLIAPK
LAEGLGAQVL VDNRPGAGGN IAVSAMLTAP ADGHTLLMCT TGTLSIQPHV LKSMPFDPEK
DIVPVTQVTN APYMLMVNST LPVTSVKELV AYARQKPGEL NFASSGTATG GHLAGEMLKT
RAGIDIVHVA YKGTGQAMTD LLAGQVSMIF DQPVSSMQYA RSGKLRALAV ASSRRLAAFP
DIPTVTEAGI PDFEPVTWAG ICAAKNTPPA VVERIQREVA KVLAMPEIAK RLAADGLEPV
GSTPEQFRAF LAADKRKWGR VVKDADVKAE
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