| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5799 |
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| Symbol | |
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| ID | 7974920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 501615 |
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| End bp | 502613 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796380 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947654 |
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| Protein GI | 239820469 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCA CCTTTAAGCA GCTGGAGGCC TTTCTCTTCA GCACCAAGCT CCAGAGCTTC
AGCGCGGCGG CGGTGAAGCT GCACACCACG CAGTCGGCCA TCTCCAAGCG CCTGGCCGAA
CTCGAGGAGT CGCTGGGCGG GACGCTGCTG CACCGCACCT CCCATGGGCT GGAACTGGCC
CAGGCCGGGC GCGAATTGCT GCCGCTGGCC GAGGAAGCCC ATCGCCTGTG GCAGCGCATC
CAGCACGACA TCAGCGTGGA CAAGACGCTG CGCGGCACTT TCCGCGTGGG CGTGACGGAA
CTGATTGCCA TGACGTGGCT CACGCGGCTG ATCCAGCTGC TTCAGAAGCT GCACCCCCAG
GTGACGCTGG AGCCGGTGGT GGACGCGGGG CTGACGCTCT TCGAGCGCCT CGAGGCCAAC
AAGCTCGACC TGTCCATCAT GCCGGGCACT TTCTGGGGCC AGGCGTTCGA ATCGATCAAG
GTCGGGCAGG TGGACCAGGC CTGGATCGCG AGCCCGCGGC TCGGCATTCC GCAACGAGCC
CTGGCGCCGC ACGAGTTTGC CGACTATCCG GTGATCGAGC AGCCCGCGGG CGCCTCGAAG
AACAAGTTCT ACGAGGCCTG GCGCGCGGAG CACGGGTTCC GCTTCGGCAA GGTCATGCTG
ACGAACAGCA CGACCGTCCT GCGCGAGCTG ACGATCAGCG GCTTCGGCAT CAGCCAGCAA
GCGCTCGACT ACGTGCGCCC GGACATCAAG AGCGGCCTGC TGCGCATCGT CAAGAGCGAC
CCGATGCCGC CACCGCTGGT CTACAGCGCG GTCTATCGGA GCGACAATTC CAGTCCTGCG
CTGGCACGCA TCGTCGAACT GGCCGTGAAG ACCTGCGATT TCAAGTTGCG GGCGAGCCAG
CACGACGTGG CCCCGGCCCG GCCGTTGCGG GGCTCGAGTT CAGGCCTGCG GCAACGGCCG
GTACGCAAGG GCGTGAAGAA GAAGCCGGCG AGAAGCTAG
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| Protein sequence | MNFTFKQLEA FLFSTKLQSF SAAAVKLHTT QSAISKRLAE LEESLGGTLL HRTSHGLELA
QAGRELLPLA EEAHRLWQRI QHDISVDKTL RGTFRVGVTE LIAMTWLTRL IQLLQKLHPQ
VTLEPVVDAG LTLFERLEAN KLDLSIMPGT FWGQAFESIK VGQVDQAWIA SPRLGIPQRA
LAPHEFADYP VIEQPAGASK NKFYEAWRAE HGFRFGKVML TNSTTVLREL TISGFGISQQ
ALDYVRPDIK SGLLRIVKSD PMPPPLVYSA VYRSDNSSPA LARIVELAVK TCDFKLRASQ
HDVAPARPLR GSSSGLRQRP VRKGVKKKPA RS
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