Gene Vapar_5793 details

Gene Information

• Locus tag: Vapar_5793
• ID: 7974914
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: +
• Start bp: 494692
• End bp: 495252
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644796374
• Product: transcriptional regulator, MarR family
• Protein accession: YP_002947648
• Protein GI: 239820463
• COG category: [K] Transcription
• COG ID: [COG1846] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGACA CGCAAGGCAT GCAAGCCTTT CCCGACGCCA GCGCCCTGCG CGCGCCCCGC 
TCCCTGGACG AGCTGCTGCT GTACCGGCTT TCGCGCGCGG TGCGCACCGC CAGCGGCATG 
GCCACGCGCC TGGTCGAAGG CGGCTTCGGC ATCACGCGGC GCGAGTGGGG AATGATCGGC 
ACGCTCGCGC AGCATGGCGA GATGAGCTCC TCGGCGCTGG CCGCGCACCT GCAGCTGGAC 
CGCGTGCGCA CCTCGCGCGG CCTGCGCAGC CTGGTCGAGA AGAAGCTGGT CTCGCGCCGG 
CAGGACGAGG AGGACCGGCG CGGCGTGCAT ATCCGGCTGA GCCCCTCGGG CCGGGAGCTC 
TTCGAGCGGG TGTTCCCGCG CATCGCGGCG CTCAACACCG ATCTGCTCGC CGGCATCGCG 
CCCGCGCAGC TCGACGTGTT CCTGCAGTGC CTGCAGCACC TCGAGCAGCG CGCCGGCGCG 
CTGAGCGCAC AGGGCGTGGT GGTGGAGAAG GCCGACCGGC GCGCGGGCGG CACCCGGCAC 
CGCTGGCCTG AGGCGGGCTG A 

 

Protein sequence

MHDTQGMQAF PDASALRAPR SLDELLLYRL SRAVRTASGM ATRLVEGGFG ITRREWGMIG 
TLAQHGEMSS SALAAHLQLD RVRTSRGLRS LVEKKLVSRR QDEEDRRGVH IRLSPSGREL 
FERVFPRIAA LNTDLLAGIA PAQLDVFLQC LQHLEQRAGA LSAQGVVVEK ADRRAGGTRH 
RWPEAG