Gene Vapar_5791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5791 
Symbol 
ID7974912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp493021 
End bp493416 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content63% 
IMG OID644796372 
Producthypothetical protein 
Protein accessionYP_002947646 
Protein GI239820461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCTTACC TGCAACTCGA CGTCAACGAC AGCTATCCCG AGGATTTGAA GCAACAGCTC 
GCGGCTCGGA TGTGCGAGAC CTATGCGTCG ATGATGAGCG TTGATATTCG GCGAATATCC
GTAGCGATCC GGGAATTGGG CGCCGGCGCT ATCTGGCGCG TCGCCGAAGC GGGCAAGGCG
CCTGTGCCCG TTTCCTTGCT GATGCTGGAC ATCCGCCGCG GCCGGCCAGC CGAGCTTCGG
ATGGAGGTAG CCAAAGCCTT GTGCGCGCAT TGCATCGAAC TGCTGGGCCT GCGCGAGGAC
CGATTGAACG TCGAGTTCAC CCAGCACGAT GGCGACGAGA TGTACCACCC CGCCCTGGGT
GGCTTCAGCC CGGACTGGCG GCCGGGAGAA ACCTGA
 
Protein sequence
MPYLQLDVND SYPEDLKQQL AARMCETYAS MMSVDIRRIS VAIRELGAGA IWRVAEAGKA 
PVPVSLLMLD IRRGRPAELR MEVAKALCAH CIELLGLRED RLNVEFTQHD GDEMYHPALG
GFSPDWRPGE T