Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5778 |
Symbol | |
ID | 7974899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 482744 |
End bp | 483574 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644796359 |
Product | Methyltransferase type 11 |
Protein accession | YP_002947633 |
Protein GI | 239820448 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.537325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAATC GAGTCAACCA AGCCATCCAG GCGCATTACG GCCGCCCGGA TGTGGGAAGC GTCATTCTGG CGGCCCTGGA AAAGGCGGGC AAAGACCTGG ACCGCCTCAC GCCGGAAGAC TTGGCACCTG TCGACGAGTT TCATATCCGG GGCCGGGCTG CGACGCTGGA GCTCGCCCGG GCCGCGGGTC TCGATGCGAA CAAGCGTGTG CTCGATGTCG GCAGCGGTGT TGGCGGAACT TCGCGCTGCC TTGCAAGGGA GTTCGGTTGC CACGTCACCG GCATTGACCT CACAGACGAA TACTGCCGCG CCGCTGCAAT GCTCTCTGCC AAGGTCGGCC TGGCGGACCT GGTCGATTAT CGCCAGGGTG ATGCCACCCA CCTGCCGTTT GATGACGGCG TGTTCGACGT CGTCTGGACG GAGCACGTGG CCATGAACAT TCCAGACAAA CTCCGGCTGT ACAAGGAGAT GCACCGGGTT CTGAAGCCGG GCGGCACGCT CGCCATCTAC GACGTATTGG CCGGCCCTTC CGGACCGGTC CTGTTTCCCG TCCCGTGGGC GCGCACGCCG GATACGAGCT TCCTCGTGCA GCCGGACGAG TTGCGCAGGC TTCTCGAGAA CGCTGGATTC ACGATTTCCG ACTGGATGGA CACGACCGAG GCAGCGCGCA CGTGGTTTGT GTCCCTGGCC GAGAAGATCC GCAAGGAAGG CTTTCCGCCG CTTGGATTCC ATCTGCTCCT CGGGGCCGAC TTTCAGGCGA TGGCACAAAA TCAGGGGCGA AATCTCCAGG AAGGGCGGAT AGTTCTTGGA CAAGTTGTCG CAAGGAAATA G
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Protein sequence | MPNRVNQAIQ AHYGRPDVGS VILAALEKAG KDLDRLTPED LAPVDEFHIR GRAATLELAR AAGLDANKRV LDVGSGVGGT SRCLAREFGC HVTGIDLTDE YCRAAAMLSA KVGLADLVDY RQGDATHLPF DDGVFDVVWT EHVAMNIPDK LRLYKEMHRV LKPGGTLAIY DVLAGPSGPV LFPVPWARTP DTSFLVQPDE LRRLLENAGF TISDWMDTTE AARTWFVSLA EKIRKEGFPP LGFHLLLGAD FQAMAQNQGR NLQEGRIVLG QVVARK
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