| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5775 |
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| Symbol | |
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| ID | 7974896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 479961 |
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| End bp | 480350 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796356 |
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| Product | protein of unknown function DUF35 |
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| Protein accession | YP_002947630 |
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| Protein GI | 239820445 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0423668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACC ACCGCCTCGG CGTGCAGGCC TTCCACCAGC GCGAGCTGGA CGCCGGCCGT
TTCCTGCTGC AGCGCTGCGG CGACTGCGGC CGCCACGTCT ACTACCCGCG CGAAAGCTGT
CCGCACTGCG GCGGCACGGC GCTCGAATGG AAGGCGCCTG GCGGCCTGGG CACCGTGCAT
GCCGTGACGA CCGTGCGGCG CAAGCCGGCC GACGGCGGCG ACCTCAACGT GAGCCTGGTC
GATCTCGACG AAGGCGTGCG GCTCATGAGC CGCATCGAGA ACCTCGCGCC CGAAGCGGTG
CGCATCGGCC AGCGCGTCCG CGCGCGGGTG CAGGTGAAGG ACGGCCGCGG CCTGGTGCTG
TTCGATGCCG TCGAAGGAGC CACTCGATGA
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| Protein sequence | MNDHRLGVQA FHQRELDAGR FLLQRCGDCG RHVYYPRESC PHCGGTALEW KAPGGLGTVH
AVTTVRRKPA DGGDLNVSLV DLDEGVRLMS RIENLAPEAV RIGQRVRARV QVKDGRGLVL
FDAVEGATR
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