| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5768 |
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| Symbol | |
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| ID | 7974889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 473373 |
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| End bp | 474566 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796349 |
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| Product | lipid-transfer protein |
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| Protein accession | YP_002947623 |
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| Protein GI | 239820438 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGTA TGCAGCGCCC CGTCCATGTG GTCGGCGTGG GCATGATCCC CTTCACCAAG
CCCGGCGCCA GCGACCCCTA CACCGTGATG GGTGCGCGCG CCGCCAGGCT TGCGCTCGAC
GACGCCGGCG TCGACTATTC ACTGGTGCAG CAGGCCTATG TCGGCTATGT CTACGGCGAC
TCCACCGCGG GGCAGGCCGC CATCTACGGC GTCGGCCTGA GCGGCATTCC GGTGTTCAAC
CTCAACAACA ACTGCTCCAC CGGCTCCAGC GCGCTGTTCC TCGCGCGCCA GGCGGTCGAG
AGCGGCATGG TCGAATGCGC GATCGCGCTC GGCTTTGAGC AGATGCAGCC CGGCGCGCTC
AAGGGCGCCT ACGACGACCG CCCCTCGCCG ATGGCGCGCT TCGCCGAGAC CATGGCCGAA
AAGCAGGGCT ACGTGCCCGA AGCGCCGCGC GCCGCGCAGT TCTTCGGCGG CGCCGGCCGC
GACTACATGG CGCAGCACGG CATCCGGCGC GATACCTTCG GCCGCATCTC GGTGAAGGCG
CGCCAGCATG CGGCGCGCAA CCCGCTCGCG GTGTTCCGCC AGACGCTGAC GCTCGACGAG
GTGATGGCCT CGCCGCTGGT GTTCGATCCG CTCACGCGCT TCCAGTGCTG CCCGCCCACC
TGCGGCGCGG CCGCGGCCAT CGTCTGCTCG GCCGAGTTCG CAGAGAAGCA CGGCCTCGAC
ATGCGCGTGG TGATCGCCGC GCAGGCCATG ACCACCGATA CGCCTTCCAC CTTCGAGAGC
AAGGACATGC GCAAGCTGGT CGGCTACGAC ATGACCGCCG CCGCCGCCCG CCAGGTGTAC
GAAGACGCCG GCATCGGCCC CGAGGAACTC GACGTGGTGG AGCTGCACGA CTGCTTCACC
GCCAACGAGC TCATCACCTA CGAGGCGCTG GGCCTCACGC CCGAGGGCAC GGCCGAGCGC
TTCATCGTCG AGGGCGACAA CACCTACGGC GGGCGCGTGG TAACCAATCC TTCGGGCGGC
CTGCTGTCCA AGGGCCATCC GCTCGGCGCC ACGGGCCTTG CGCAGTGCGC GGAGCTGGTG
TGGCAATTGC GCGGCCGGGC CGAGCAGCGC CAGGTCGAAG GCGCACGGCT CGCGCTGCAG
CACAACCTGG GCCTGGGCGG CGCCTGCGTG GTCACGCTCT ATCAATCCAG ATGA
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| Protein sequence | MTRMQRPVHV VGVGMIPFTK PGASDPYTVM GARAARLALD DAGVDYSLVQ QAYVGYVYGD
STAGQAAIYG VGLSGIPVFN LNNNCSTGSS ALFLARQAVE SGMVECAIAL GFEQMQPGAL
KGAYDDRPSP MARFAETMAE KQGYVPEAPR AAQFFGGAGR DYMAQHGIRR DTFGRISVKA
RQHAARNPLA VFRQTLTLDE VMASPLVFDP LTRFQCCPPT CGAAAAIVCS AEFAEKHGLD
MRVVIAAQAM TTDTPSTFES KDMRKLVGYD MTAAAARQVY EDAGIGPEEL DVVELHDCFT
ANELITYEAL GLTPEGTAER FIVEGDNTYG GRVVTNPSGG LLSKGHPLGA TGLAQCAELV
WQLRGRAEQR QVEGARLALQ HNLGLGGACV VTLYQSR
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