| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5762 |
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| Symbol | |
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| ID | 7974883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 467946 |
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| End bp | 468959 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796343 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002947617 |
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| Protein GI | 239820432 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.839759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTCA CCCACCACAC CGTTGCCATC CAGCAAGTGC ACAGCATCCT GATGGGCGCG
CGCCACCGCG GCGTCGATGC GGCGCGCGTG CTGGTCCGCG CGGGCATCGC GCCGTCGCTG
CTGGAATCGC CGCTCGCGCG CATCTCGCAG CGCCAGTACG CGCTGCTGAT CCGCGCGCTG
CGTCGCGAGC TGCGCGACGA GATCTGGGGC CTCTTGAGCG GCCCGCTGCC GCCCGGCAGC
TTCGGCCAGT GCATGCGCCA GCTGGTGCGC TGCGCCACGC TCGGCGAGGC CCTGCGCGAA
GGCTTCGCTT CGTACCACCT GCTGCTGCAC GACTTCGTGC CGCGCCTTGC GGTGCAGGGC
AGCAGCGCGC ATGTGCAGTT CGTGCTGCGG CGCGCTTCCG ATGCGCGGCT CGACTATGCG
GTGAAGGCCT TCATGCTGTT CGCCTTCAAC GCCTCCTCCT GGCTGGTGGC GCGCCGCATT
CCGCTGCTCG AGGTCGACTA CACGGCCGAG CAGACCAACA CCGAGACCTC GCGCGTCTAC
CAGGTGCCGA TCCGTTACGG CCAGGCGCAT GTGGGCATGT CGTTCGAGGC GCGCTGGCTC
GACCTGCCGG TGGTGCAGTC GCCGCAGAGC CTGCGCGAAT TCCTCGCGGG TTCGCCGGCC
AACCTGATCG TGAAGTACCG CGACACCAGC AGCCTCACAG AGCGCATCCG CCGGTTGCTG
CGCAAGGGCC TGGGCAGCGA GCTGCCGTCG CTGGAGGAAG TGGGCGAGGC GCTCGCGGTG
ACGCCGCAGA CGCTGCGCCG TCGCCTGCGC GACGAAGGCC GCGGCTTCCA GCAGATCAAG
GACGAGCTGC GGCGCGACGC CGCCATCGAC TACCTGCTGC ACACGCCGCT GCCGCTGCTG
GACATCGCCA ACCGCGTGGG CTTCTCGGAA GCCAGCACCT TCCACCGCGC CTTCAAGCAG
TGGACCGGCG TGGCGCCCGG CGAATACCGG CTGACGCACG GCCCGGAACG CTGA
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| Protein sequence | MTLTHHTVAI QQVHSILMGA RHRGVDAARV LVRAGIAPSL LESPLARISQ RQYALLIRAL
RRELRDEIWG LLSGPLPPGS FGQCMRQLVR CATLGEALRE GFASYHLLLH DFVPRLAVQG
SSAHVQFVLR RASDARLDYA VKAFMLFAFN ASSWLVARRI PLLEVDYTAE QTNTETSRVY
QVPIRYGQAH VGMSFEARWL DLPVVQSPQS LREFLAGSPA NLIVKYRDTS SLTERIRRLL
RKGLGSELPS LEEVGEALAV TPQTLRRRLR DEGRGFQQIK DELRRDAAID YLLHTPLPLL
DIANRVGFSE ASTFHRAFKQ WTGVAPGEYR LTHGPER
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