| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5758 |
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| Symbol | |
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| ID | 7974879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 463697 |
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| End bp | 464623 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796339 |
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| Product | manganese and iron superoxide dismutase |
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| Protein accession | YP_002947613 |
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| Protein GI | 239820428 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0605] Superoxide dismutase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.48784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCCC GGATTCAACC CCTGCCCTTC GACCCCGCCA TGCTGCGCGG CCTGTCGGAA
AAACTGCTCG CGAGCCATCA CCAGAACAAC TACGGCGGGG CGGTGAAGCG CCTCAACGCC
ATCCGCGCGC AGCTCGCCGC GACGCCGTTT GCATCCACGC CGGGCTTTCA GCTCAACGGC
CTCAAGCGGG AGGAACTGAT CGCGAGCAAC TCGATGCTGC TGCACGAGCT GTACTTCGCG
TCGCTCGGCG GCGACGGCCA ATCGATGGAA CCCGCCATGG CGCTGGCACT GGCGGCCAGC
TTCGGCAGCG CCGAGCGATG GCGCGAGGAA TTCGCGGCCC TGGGCAAGGC GCTCGGCGGC
GGCTCGGGCT GGGTGCTGCT CGCGTTCCAG CCGCGCGAGG GCACGCTGGT CAACCAATGG
GCCGCCGACC ACACCCATGC GCTGGCAGGC GCCACGCCCA TCCTTGCGCT GGACATGTAC
GAGCACGCCT ACCACCTCGA CCATGGCGCC GCGGCGGGCG CGTACGTCGA TGCCTTCATG
GACAACATCC ATTGGGGGCA GGTCTACGCG CGCTACCAGC AGGCCGTGCA TGCGGCCAGC
GAGCCTTTCG GCGCCACGCA GGACGAGATC GCCGGATCGG TGCTGCTCGA CGTGCGCCGC
GCCGGGGTGT TCGAGCGGGC CGCCGCGATG CTTCCAGGGG CGCGCTGGCG CGATCCGGCC
GCGGTCGACA GCTGGGCCTC CGAACTGCCG GCCGGCAGCG ACGTGGTGGT GTATTGCGTC
TATGGCCACG AGGTGGGGCG CAGCACCGCC ATGCGGCTGC GCGCGGCAGG CCTGAATGCA
CGCTACCTGC GCGGCGGCAT CGACGGCTGG CAGGCGGCGG GCGGGCCGCT CGAAGCCAGG
GCCGGCGTGC AAGGCGCGGC GCCCTGA
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| Protein sequence | MDARIQPLPF DPAMLRGLSE KLLASHHQNN YGGAVKRLNA IRAQLAATPF ASTPGFQLNG
LKREELIASN SMLLHELYFA SLGGDGQSME PAMALALAAS FGSAERWREE FAALGKALGG
GSGWVLLAFQ PREGTLVNQW AADHTHALAG ATPILALDMY EHAYHLDHGA AAGAYVDAFM
DNIHWGQVYA RYQQAVHAAS EPFGATQDEI AGSVLLDVRR AGVFERAAAM LPGARWRDPA
AVDSWASELP AGSDVVVYCV YGHEVGRSTA MRLRAAGLNA RYLRGGIDGW QAAGGPLEAR
AGVQGAAP
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