| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5757 |
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| Symbol | |
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| ID | 7974878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 462605 |
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| End bp | 463660 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796338 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002947612 |
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| Protein GI | 239820427 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCTC GGCATCTTTC CCTGCCCGCC GTAAAAGGCG GCCTGCTCGC ACTGCTTGCC
GCCGTTCTCT TTGGCGTCAG CACGCCGCTG GTCCAGCATT TCGGCAAGGG ACTGGGTGCC
TTCACCACCG CCGCACTGCT GTATGCGGGC GCGGCGGCCG TCGGCTTCGC GTCCCGCCAG
CGGGTAGAAC GCGAGGCCCG GATGGTGCGC GGCGATCTTC CGCGGCTCCT GTCCATGGCG
GCTTTCGGCG CGGTGCTCGG CCCCGTCGCT CTGGCCTGGG GACTGCAGCA CACGAGCGGG
ACCAGCGCAT CGCTGATGCT GACGCTGGAA GCGCTGTTCA CCGCCCTGCT GGCGCGCCTG
CTCTACCAGG AGACGATGGA CCGGCGCGTA TGGGGTGCCA TGCTGCTCCT GCTTGCCGGA
GGCATCGCGC TGGTCCTCGA CCAGGGACGC AGCGGCAGCA CGCAGCTCTG GGGAATGCTG
GCCGTGCTCG TCGCGACCGC GGCCTGGGGC ATGGACAACA CGCTCTCGCG CGCGCTGGCC
GAGCGCGATC CGGGGCAGGT GGTGCTGGGC AAGGCCGCCA TCGGCGCCAC GGCGACGGCC
TTGCTGGCGT GGCTGTTCGG CGAGCCGATG CCTGCGTCGA GCGCCGCGCT GGTCCTGCTC
GCGGTCGGCG CCAGCGGCTA TGGCCTGAGC CTTCGCTTCT ACCTGCTCGC GCAGCGCGCC
TTCGGGGCGG CGCGGACCGG CTCCGTCTTT GCCTTTGCGC CGTTCATCGG CGCCGCCTTT
GCCATTGCGC TGGGCGACCG GAGCGGGACT TGGGTGATGG CGGCGGGCGG GCTTCTGATG
ATGCTGGGCG TGGCGCTGCA CCTGGCGGAG TCGCATGGCC ACGAGCACAC GCATGAGCGC
ATGGAGCACG AGCATGCGCA CCGCCACGAC GACGGCCACC ATGACCACAC CCACGATGTG
CTCCCCGTGG GCTCGCACAG CCATCCGCAT GTGCACGAGC CCGCTCGCCA CGCGCACGCC
CACGTGCCTG ACGCCCATCA CCAGCACATC CACTGA
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| Protein sequence | MTARHLSLPA VKGGLLALLA AVLFGVSTPL VQHFGKGLGA FTTAALLYAG AAAVGFASRQ
RVEREARMVR GDLPRLLSMA AFGAVLGPVA LAWGLQHTSG TSASLMLTLE ALFTALLARL
LYQETMDRRV WGAMLLLLAG GIALVLDQGR SGSTQLWGML AVLVATAAWG MDNTLSRALA
ERDPGQVVLG KAAIGATATA LLAWLFGEPM PASSAALVLL AVGASGYGLS LRFYLLAQRA
FGAARTGSVF AFAPFIGAAF AIALGDRSGT WVMAAGGLLM MLGVALHLAE SHGHEHTHER
MEHEHAHRHD DGHHDHTHDV LPVGSHSHPH VHEPARHAHA HVPDAHHQHI H
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