| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5753 |
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| Symbol | |
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| ID | 7974874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 459588 |
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| End bp | 460742 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796334 |
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| Product | Citrate synthase |
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| Protein accession | YP_002947608 |
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| Protein GI | 239820423 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.149777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCCT GGATTTCGAT GACCGAGGCG TGCAAGCTCC TGGGCGTGCA GCCCCAGACG
ATCTACGCGT ACGTGAGCCG CGGCAAGCTC GAGGTCATGC CCGACCCGGC CGACACGCGG
CGCAGGCTCT ACCGCACCGA GGACGTGGCC GGCCTGGCCA GGCGCAAGCA GGCCGGCCGC
AAGCACGAGA CGCTGGCCGC CAACACGCTG TTCGGCTCGG AGCCCAGCAT TCCCACGGCC
CTCAGCGCGT TCTCGCGCGG GCGGCCGTAC TACCGCGGCC GCGATGCCGT GCGCATGGCC
CGGACCGCCA CGCTCGAAGA TGCGGCGCAA CTGTTGTGGG GCGCCGAACA TGCCGTCGAC
TTCACCTGCA TGGCGTCCCT GCGTTCCGGC AAGCCCGGGC GAGGCGCGGC CTTCGCGGCC
TTGGCCAGCC TGGCGGCCGC CGGCCATTCC ACCGGGGGCC GCCTGACCCG GGTGCTGCAT
GCCGAAAGCC AGGACCTGGT GGGCCGGCTG GCCAATGCGT TCGGCGCATC ACCGGGCCAT
GAGCCGCTGC ATCTTCGCTT TGCGAAAGGA TGGAAGCAGC CCGCCAAGGT GGCCGATCTG
CTGCGAACGG CCCTGGTGCT GCTGGCCGAT CACGAACTGA CCAGCTCGGC CTTTGCCGCG
CGCATTGCCG CTTCGACGGG CGCCTCGCTG CCCGCATGCC TGCTTGCGGG ATTGACCACG
CTCTCCGGCC CCTTGCACGG CGATGCCTCG GGACGCGTGC GCGCGCTGTT CAGCGAGGTG
GAACGGCTGG GCGAAGACCA GGTGCTCGCC CACCACCTCT CGAACGGCCT GTCGCTCGCC
GGATTCGGCC ATCACCTCTA CCCCGACGGC GACCCGCGCG CGGCCGCGCT GCTGGCCTTG
TTCGAGCCTC CCAAGGTGAT TGCGCGCTTC ATCGCAAAGG TGACCAAGCT GACCGGCCTG
CAGCCCAACA TCGACGTTGC GCTGGCCGCC ATGGCCGCGC ACCATCGGCT GCCTGCCGAT
GCGGCCTTCG GCCTGTTCGC CACTGCGCGC AGCGTCGGGC TCCTGGCGCA CAGCCTGGAG
CAGCTGGGCA CGGCGCAGGT GATCCGGCCG CGCGGGCGCT ATGTGGGGCC GGTGCCCGAG
GCGCTTGGCG CGTAG
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| Protein sequence | MASWISMTEA CKLLGVQPQT IYAYVSRGKL EVMPDPADTR RRLYRTEDVA GLARRKQAGR
KHETLAANTL FGSEPSIPTA LSAFSRGRPY YRGRDAVRMA RTATLEDAAQ LLWGAEHAVD
FTCMASLRSG KPGRGAAFAA LASLAAAGHS TGGRLTRVLH AESQDLVGRL ANAFGASPGH
EPLHLRFAKG WKQPAKVADL LRTALVLLAD HELTSSAFAA RIAASTGASL PACLLAGLTT
LSGPLHGDAS GRVRALFSEV ERLGEDQVLA HHLSNGLSLA GFGHHLYPDG DPRAAALLAL
FEPPKVIARF IAKVTKLTGL QPNIDVALAA MAAHHRLPAD AAFGLFATAR SVGLLAHSLE
QLGTAQVIRP RGRYVGPVPE ALGA
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