| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5748 |
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| Symbol | |
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| ID | 7974869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 455078 |
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| End bp | 455569 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796329 |
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| Product | Cupin 2 conserved barrel domain protein |
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| Protein accession | YP_002947603 |
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| Protein GI | 239820418 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0248088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCACCC GACCCTTGAA GGCCGCGCTC TACCTTGCGG CCCTGAACTC CATCGGCGCA
GGCGCCGAAC CCGCCCCGGC ACCGGGGGCG GCCCAGCAGA TCGCGAGGGC CGGCAGCCAA
CCTTCGGCAG CCGGCCCTGC CGAATACTTC ACCGGCCGCG TCCGCGTCGA CCCGCTCTGG
CCCGCCACCG AAACCCTCAA CGCCTCGGGT GGCCTCGTGA CCTTCGAGCC CGGCGCGCGC
TCCGCCTGGC ACACCCACCC GGCCGGGCAG CGCCTGGTGG TGCAGTCGGG CCTCGGCCTG
ACCCAGGAGT GGGGCCAACC CGTGCAGGAG ATCCGCCCCG GCGACGTCGT CTGGTGCCCT
CCGGGCGTCA AGCACTGGCA CGGCGCCGCT CCGTTCACGG CACTGGTCCA CCTGGCCGTC
ACCGGCACCG TGGACGGCAA GAACGTCGAA TGGATGGAGA AGGTCAGCGA TGAGCAATAC
AACCAGCGCT AG
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| Protein sequence | MCTRPLKAAL YLAALNSIGA GAEPAPAPGA AQQIARAGSQ PSAAGPAEYF TGRVRVDPLW
PATETLNASG GLVTFEPGAR SAWHTHPAGQ RLVVQSGLGL TQEWGQPVQE IRPGDVVWCP
PGVKHWHGAA PFTALVHLAV TGTVDGKNVE WMEKVSDEQY NQR
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