| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5747 |
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| Symbol | |
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| ID | 7974868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 454028 |
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| End bp | 454942 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796328 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002947602 |
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| Protein GI | 239820417 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.017343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG AAAACCTGAA CGATCTCCAG GCCTTCGTGG TGGTTGCCCG CGAACGCAGC
TTCACCCGTG CCGCCGCCCA GATGGGCGTG TCGCGCTCGG CGCTCAGCCA TTCGATGCTG
GCGCTGGAGG CGCGCCTGGG CGTGCGCCTC CTGACCCGCA CCACGCGCAG CGTCTCCGTG
ACCGACGCAG GCGCCCGGCT CCTCCATACG CTGGCCCCAC GGTTGCAGGA CATCGAGCGG
GAGCTCGAAT CCCTTTGCGC AATGCGCGAC AAGCCGGCCG GCACGGTCCG CATCACCACG
CATGACCATG CGGTTGCCAC GGTGCTGTGG CCCAGGCTCC TGCCGCTGCT CAAGCAGCAT
CCGGACATCC AGGTGGAGTT CAGCGTCGAC TACGGCTTCA CCGATATCGC CGCCGAAAGG
TTCGATGCCG GCGTGCGGGT GGGAAACCGC GTCGACAAGG ACATGGTGGC GGTCCCGATC
GCACCGGCGC TGAGGATGGC GGTGGCGGCT TCTCCGGACT ACCTCGCGGG CAAGCCTGTG
CCGGTGAAAC CCGCGGACCT CACGGCGCAC CGCTGCGTGA ACCTGCGGCT GCCGACGCAC
GGCGGCCTGT ACGCCTGGGA TTTCGAGAAG GGAAGGAAGC AGGTCAGCGT GCGGGTGCAA
GGCCAGACGG TGTTCAACAA CACCTTCCTG ATGCTGCGCG CGGCACTGGA CGACATGGGC
TTTGCCTATG TGCCCTTCGA CATCATGGAA CAGCACATCG AAGAGGGGCG GCTCGTTCCG
GTCCTGCAGG ACTGGTGGCC GGCCTTCCCG GGCTACCACC TCTACTACGC CCATCGCCGC
CAGCTTTCCC CGGCGCTCGC CCTGGTCATC GAAGCCTTGA GGTACCGGGC GCCGCCGCCC
AGGCGAACGG GGTGA
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| Protein sequence | MAKENLNDLQ AFVVVARERS FTRAAAQMGV SRSALSHSML ALEARLGVRL LTRTTRSVSV
TDAGARLLHT LAPRLQDIER ELESLCAMRD KPAGTVRITT HDHAVATVLW PRLLPLLKQH
PDIQVEFSVD YGFTDIAAER FDAGVRVGNR VDKDMVAVPI APALRMAVAA SPDYLAGKPV
PVKPADLTAH RCVNLRLPTH GGLYAWDFEK GRKQVSVRVQ GQTVFNNTFL MLRAALDDMG
FAYVPFDIME QHIEEGRLVP VLQDWWPAFP GYHLYYAHRR QLSPALALVI EALRYRAPPP
RRTG
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