| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5746 |
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| Symbol | |
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| ID | 7974867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 453014 |
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| End bp | 454000 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644796327 |
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| Product | beta-lactamase |
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| Protein accession | YP_002947601 |
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| Protein GI | 239820416 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0186796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCCGG ATCTTGCGGC GCGCCTGGAC CAGGGCGTGC AAAGCGGCGA GTTCTCGAAT
CTGCATGCCG TCTTCATTGC GCGCAAGGGC CGGGTCGAGA TGGAGCGCTA CTTCGAAGGC
CCGGACGAAC GCTGGGGTAC GCCGCTGGGC ACGGTTGCAT TCAACGCCGA TACCTTGCAT
GACCTTCGTT CCGTCAGCAA GAGCATCGTG GGCTTGCTCT ACGGCATCGC ACTCGCCGAA
GGCAAGGTTC CCGCGCTCGA TGCGCCGCTG CTGGACGCCT TTCCCGCCTA CGCTGACCTG
GCCCGCGACG AGCGCAGGCG TGCGATCCGC ATCTCCCATG CCCTCGCGAT GACAATGGGC
CTGGAGTGGA ACGAGGACCT GCCCTACAGC GATCCGCGCA ACAGCGAAAT TTCGATGGAG
CGCAGCAAGG ATCGCTACCG CTATGTGCTG GAACGCCCCA TCGTCGCCAA CCCGGGTGAA
CGGTGGCGCT ACTCGGGCGG CGCAACGGCC GTGCTGGGCC ATCTCATCGC CAAGGGCGCG
GGCGTGCCGC TGCTGGACTA CGCACGCGAC AAGCTGTTCT CGCCCATGGG CATCGAGAAG
GTCGAGTGGA CCCATGGTTT CAATGGAGAG GCCGCCGCGG CATCGGGCCT GCGCATGCGC
GCGCCGGATC TGGCTCGCGT TGGCCAGCTG CTGCTCCAGC GCGGCGAGTG GAACGGCCGG
GCGCTGGTTC CGAAGGATTG GATCTCCGAG TCGCTGACGC CGCGCGCCGA CGCTTTCGAC
GGCCTCCGGT ATGGCTACCA CTGGTATGTG ATCCAGCGCC AGGATGGCTC GCCCGCCTAC
ATGGCGATCG GACTCGGAGG CCAGCGGCTG GTCGTCATTC CTGCGCTCGA GCTGGTGTAT
GTCATTTTCA TGGGCAACTA TTACCGCGAA GACCAGCTCA AGCCGCTCTT CGCGGTGCAG
AAGCTGATCC ACGCGTCGCT GCGCTGA
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| Protein sequence | MAPDLAARLD QGVQSGEFSN LHAVFIARKG RVEMERYFEG PDERWGTPLG TVAFNADTLH
DLRSVSKSIV GLLYGIALAE GKVPALDAPL LDAFPAYADL ARDERRRAIR ISHALAMTMG
LEWNEDLPYS DPRNSEISME RSKDRYRYVL ERPIVANPGE RWRYSGGATA VLGHLIAKGA
GVPLLDYARD KLFSPMGIEK VEWTHGFNGE AAAASGLRMR APDLARVGQL LLQRGEWNGR
ALVPKDWISE SLTPRADAFD GLRYGYHWYV IQRQDGSPAY MAIGLGGQRL VVIPALELVY
VIFMGNYYRE DQLKPLFAVQ KLIHASLR
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