| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5745 |
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| Symbol | |
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| ID | 7974866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 451771 |
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| End bp | 452643 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796326 |
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| Product | 6-phosphogluconate dehydrogenase NAD-binding |
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| Protein accession | YP_002947600 |
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| Protein GI | 239820415 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0651815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAGA ATATCGGCAT GATCGGCATC GGCATGATGG GCCACGGCAT TGCCAGCAAC
ATCGCCAGGC ATGGCTACCC GCTGGCGGTG CTCGAGCACC CCGGCAACCA GCCGCTGGAC
GCGCTCAAGG CCGCCGGCGC GCGCAGCTTC ACGCGCGCGG CCGAGCTGGC CGCGCAGTCC
GACATCGTCA TCCTCGTGCT CACGGGCTCG CCCCAGGTCG AGGCCGTGCT CACGGGTGAG
GGCGGCGTGC TGCAGGGCCT GCGCCCGGGC AGCATCGTGA TCGACTGCTC CACCGCGATT
CCCGCTTCCA CGCTGCGCAT GGCCCAGGCC GTGCAGGCCG CGGGCAGCCG CTTCCTGGAC
ACGCCGATGA CGCGCACGCC GAAGGAAGCG GCCGAAGGCC GGCTCAACCT GCTGGTGGGC
GGCGATGCGG CCCTGCTCGA GGAATGCCGC CCGCTGCTGT CGTGCTTTGC CGAGAACATC
CTGCACGCGG GCCCGGTGGG CGCAGGCCAT GGCATGAAGC TGCTGCACAA CTTCGTCTCG
CTGGGCACGG TGGCGCTGAT CGCCGAGGCG GCGGCCTGCG CCGGCCAGCA CGGCGTGGCG
CCCGAGATGT TCGTGGAGAT CCTGGCGAAG GGCGGCGGCG GCGGCGTGGC GCTGGAGCGG
CTGCGGCCCT ACCTCACGGC CAAGGACACG TCGAGCCTGC GCTTCTCGAT CGCCAATGCG
AGCAAGGACC TCGGCTACTA CAACACCATG GCGGGCGATG CCGGTGCGCA CCGCGACATT
GCGGCGGCGG TGCTGCAGAC GCTGCAGCAT GCGCAGGGCC TGGCGCCCGA AGCCCTGGTG
CCCGAGCTGG CGGACCTGCT GGCCCGGCGC TGA
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| Protein sequence | MKKNIGMIGI GMMGHGIASN IARHGYPLAV LEHPGNQPLD ALKAAGARSF TRAAELAAQS
DIVILVLTGS PQVEAVLTGE GGVLQGLRPG SIVIDCSTAI PASTLRMAQA VQAAGSRFLD
TPMTRTPKEA AEGRLNLLVG GDAALLEECR PLLSCFAENI LHAGPVGAGH GMKLLHNFVS
LGTVALIAEA AACAGQHGVA PEMFVEILAK GGGGGVALER LRPYLTAKDT SSLRFSIANA
SKDLGYYNTM AGDAGAHRDI AAAVLQTLQH AQGLAPEALV PELADLLARR
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