| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5743 |
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| Symbol | |
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| ID | 7974864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 449253 |
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| End bp | 450281 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796324 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_002947598 |
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| Protein GI | 239820413 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.311436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATCG ACTGCCACGG CCACTACACC ACGGCGCCCA AGGCGCTCGA GAACTGGCGC
AGCCAGCAGA TCGCCGGGTT GAAAGACCCC GCGCTGAAGC CCCGCGCCGC CGACCTGAAG
ATCAGCGACG ACGAGTTGCG CGAATCGATC GAGGGCAACC AGCTGCGCCT CATGAAGGAG
CGCGGCAGCG ACCTGACGAT CTTCAGCCCG CGCGCGAGCT TCATGGCGCA CCACATCGGC
GATTTCGAGA CTTCGTCGAC CTGGGCCGCC ATCTGCAACG AGCTGTGCTT TCGCGTGAGC
GAGCTGTTCC CCGACCACTT CATCGGCGCG GCCATGCTGC CGCAGTCGCC GGGCGTGGAC
CCGCGCAGCT GCATTCCGGA ACTCGAGCGC TGCGTGCGCG AGTACGGCTT CGTGGCCATC
AACCTCAACC CCGATCCCTC GGGCGGGCAC TGGACCTCGC CGCCGCTGTC GGACCGCCAC
TGGTACCCGC TCTACGAGAA GATGGTGGAG CACGACATTC CGGCGATGGT GCATGTGAGC
ACGAGCTGCA ACGCCTGCTT CCACACCACC GGCGCGCACT ACCTGAATGC CGACACCACG
GCCTTCATGC AGTGCCTCAC CTCGGACCTG TTCAGCGACT TTCCCACGCT GCGCTTCGTG
ATCCCGCACG GCGGCGGCGC GGTGCCCTAT CACTGGGGGC GCTTTCGCGG GCTGGCGCAG
GAGATGAAGA AGCCGCTGCT CAAGGACCAC CTGCTCAACA ACATCTTCTT CGACACCTGC
GTGTACCACC AGCCGGGCAT CGACCTGCTG ACGCGCGTGA TCCCGGTCGA CAACATCCTG
TTCGCGAGCG AGATGATCGG CGCGGTGCGC GGCATCGACC CCGAGACCGG CTTCTTCTAC
GACGACACGC GCCGCTACAT CGACGCCACG CCCCTGCTCG ACGCTGGGGC GCGCCACAAG
GTGTTCGAAG CCAACGCACG CCGCGCGTAC CCGCGCCTGG ACCGCGCACT CATCGCCAAG
GGGCTCTGA
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| Protein sequence | MIIDCHGHYT TAPKALENWR SQQIAGLKDP ALKPRAADLK ISDDELRESI EGNQLRLMKE
RGSDLTIFSP RASFMAHHIG DFETSSTWAA ICNELCFRVS ELFPDHFIGA AMLPQSPGVD
PRSCIPELER CVREYGFVAI NLNPDPSGGH WTSPPLSDRH WYPLYEKMVE HDIPAMVHVS
TSCNACFHTT GAHYLNADTT AFMQCLTSDL FSDFPTLRFV IPHGGGAVPY HWGRFRGLAQ
EMKKPLLKDH LLNNIFFDTC VYHQPGIDLL TRVIPVDNIL FASEMIGAVR GIDPETGFFY
DDTRRYIDAT PLLDAGARHK VFEANARRAY PRLDRALIAK GL
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