| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5726 |
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| Symbol | |
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| ID | 7975779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 438365 |
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| End bp | 439225 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796307 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002947581 |
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| Protein GI | 239820396 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGA ACCCGCACCA CGACTGCCGC GTCTTCGGCT CGCCCTGGGA AGGCGTGCAT
GGCACCCGCA TCTCGAGCCA ACGGCGCTAC GGCAGGCATT GGCATGCCAC CTTCGGCATC
GGCGTCATCG ACGAAGGCGC CCAGCGCTCG GCCAGCGGGT GCGGCGAGGT CGAGGCCCAT
GCCGGCCATC TCATCGCGAC GAATCCGGGC GAAGTGCATG ACGGGCGGCC GCTCGGCGCG
CCGTTCCGGC GCTGGCGCAT GCTGTATCTC GAACCCGCTG CGATCCGATG GGCCGTGGAT
GCGGCTGCAA TGGGCGCGGC GAACGAGGAC ATGGCCCTGG TCCGCCCCGT CATCAAGGAC
GAGGGGTTGC GGCGCATGCT CGGCGAGCTC CTGCGGCTGC TGGAGGCGCG CACTGCCGCG
CCGCAGCGGG CAGAGGTGGA TGCACTGCGC TGCGAGGAGC TGCTCGTGCA GACCTGCACC
ATGCTCGCAT CGCGCCACGG TGCGCAAAGG CTGCCCACGC GCGCCGCATC GGCCGACGTC
TCGCAAGCGC GCGACATGCT CGCGGATTGC CTTGCGCAGC CGCCCAGCCT GGCGCAGCTC
GCTGCGTCTT CGGGGCTGAG CAAATACCAG CTGCTGCGGC GCTTCAAGGC GGTCCATGGC
GTTACGCCGT TCGCGTGGCT GCTGCAGCAG CGCGCGGAAG TGGCGCGCGG CCTCATCCGG
CGCGGCACTG CACTGGCGGA TGCGGCCATG GCGACGGGCT TTGCCGACCA GAGCCACATG
ACGCGCGCGT TTGCACTGCA CTTCGGCTTC ACGCCTGGTG CATGGCAGCG CGCCTGGGCG
GCGCCCGCAC GGCTGCAATA G
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| Protein sequence | MMKNPHHDCR VFGSPWEGVH GTRISSQRRY GRHWHATFGI GVIDEGAQRS ASGCGEVEAH
AGHLIATNPG EVHDGRPLGA PFRRWRMLYL EPAAIRWAVD AAAMGAANED MALVRPVIKD
EGLRRMLGEL LRLLEARTAA PQRAEVDALR CEELLVQTCT MLASRHGAQR LPTRAASADV
SQARDMLADC LAQPPSLAQL AASSGLSKYQ LLRRFKAVHG VTPFAWLLQQ RAEVARGLIR
RGTALADAAM ATGFADQSHM TRAFALHFGF TPGAWQRAWA APARLQ
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