| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5724 |
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| Symbol | |
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| ID | 7975777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 436811 |
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| End bp | 437593 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796305 |
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| Product | transcriptional regulator, IclR family |
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| Protein accession | YP_002947579 |
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| Protein GI | 239820394 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCA TCCTCGAACG CAGCTTCAAG GTCCTTGAAC ACCTGGCCGG CCACCCCGAA
GGCCGCGCGC TTTCCGCGCT CTCCGCCGAG CTGGAGATGC CGCTGAGCGC CACCCACCGC
CTGCTGGGCG AGCTGATCCG CTGCGGCTAT GTGCGGCAGG ACCAGAGCCA TGGCGACTAC
ATGCTCACGA TCAAGCTGGT GTCGCTCGGC CTGAGCTTCC TGAGCAACAG CGGCATCGTC
GACGTGGCAC AGCCGCTGCT CGACCGGCTC GCGGCCGAAT CGGGCGAGCT GGTGCGGCTG
GCGGTGGTCG ACGGCGACGA GCTGACCTTC GTCGCCAAGG CGCAAGGCGC CGTGCGCGGC
CTGCGCTACG ACCCCGACAT GGGCCTCTCG GTCAACCTCT CGTGCAGTTC CGCGGGCCAC
GCGTGGCTGT CGACCATGAC GGACGAACAG GCGCTCCAGC TGGTCGCCAG GCAAGGCTTC
GGCAAGCCCG AGGACTACGG CCCGAAGGCG CCGACCACCG TCAAGGCACT GCTGGTGTAC
CTGCGCGCGG CCCGCAAGCG CGGCTTCGCG ATGATCAACG AGGTGTTCGC GCCCGCCATG
ACGGCCATGG CCGCCCCGGT GCGCAGCGGC AACGGCGCGG TGATCGGCGT CATCACCATC
GCCGGTCCGC TGGTGCGGCT GACGGAAGAA CGCATGCTCG CGCTGGGCCC GGCCCTGCTG
GCCACGGCCG AGGATGTGGC GCACGCGAGC GGCGCGTCCG CGCTCTTCAA GCGGCGCGCC
TGA
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| Protein sequence | MSAILERSFK VLEHLAGHPE GRALSALSAE LEMPLSATHR LLGELIRCGY VRQDQSHGDY
MLTIKLVSLG LSFLSNSGIV DVAQPLLDRL AAESGELVRL AVVDGDELTF VAKAQGAVRG
LRYDPDMGLS VNLSCSSAGH AWLSTMTDEQ ALQLVARQGF GKPEDYGPKA PTTVKALLVY
LRAARKRGFA MINEVFAPAM TAMAAPVRSG NGAVIGVITI AGPLVRLTEE RMLALGPALL
ATAEDVAHAS GASALFKRRA
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