| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5717 |
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| Symbol | |
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| ID | 7975770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 431325 |
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| End bp | 432188 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644796298 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_002947572 |
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| Protein GI | 239820387 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTT TGTCATTTGT CCATCAAGGC CGCGAAACCT GGGGCGCCGT CGTCGGCGAC
GGCGTGGTCG ATCTCGGCAA GGCGCGGCCG CAGCATGCGG GCCTGGTCGA CTACATCGCC
TCGGGCGAGT ACCTGCAGGC GGCGCAGCAT GTCGAAGGAC TGCCCATCGC GGCCAGGCTC
GCCGACATCA CCTACCTGCC GCCGATCCCC AGGTCCGAGA AGATCGTGTG CGCGGTGCGC
AACTACATGG ACCACCACCA GGAGGTGCTG GCCGCCGGCA TGCATCGCGA GCTCTCCGAG
CAGCCGCCGA TCTTCCTGCG CGTGTGGCGT TCGCAATGCG CACACAACCA GCCGATCGTG
CGGCCGCACG TGTCGGAATC GCTCGACTGG GAAGGCGAGC TCGCCGTCAT CATCGGCAAG
GGCGGGCGCA ACATCGCCGA GGCCGACGCC TTCGATCATG TGGCAGGCTA TTCCTGCTAC
AACGACGGCA GCGTGCGCGA GTGGCAGTTC CATGCCAAGC AGATCGCCTC GGGCAAGAAC
TTCGAGTCGA CCGGCGGCTT CGGCCCCTGG ATGGTGACGG CCGACGAGAT CGCGCCCGGC
CGCGAACTCA AGCTCGAGAC CCGGCTCAAC GGCGAAGTGG TGCAGAGCAG CCACACGGGC
CACATGATCT TCAGCATTCC GAAGCTCATC AGCTACTCGT CGACCATCTT CACGCTCGCG
CCCGGCGACG TCATTGCCAC CGGCACGCCG GCCGGCGTGG GCTGGAGCAA GAAGCCGCCG
CGCTTCATGA AGCCGGGCGA CGTGTGCGAG GTCGAGATCG AAGGCATCGG CGTGCTGCGC
AATCCCATCG TCCAGCAGGA CTGA
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| Protein sequence | MKLLSFVHQG RETWGAVVGD GVVDLGKARP QHAGLVDYIA SGEYLQAAQH VEGLPIAARL
ADITYLPPIP RSEKIVCAVR NYMDHHQEVL AAGMHRELSE QPPIFLRVWR SQCAHNQPIV
RPHVSESLDW EGELAVIIGK GGRNIAEADA FDHVAGYSCY NDGSVREWQF HAKQIASGKN
FESTGGFGPW MVTADEIAPG RELKLETRLN GEVVQSSHTG HMIFSIPKLI SYSSTIFTLA
PGDVIATGTP AGVGWSKKPP RFMKPGDVCE VEIEGIGVLR NPIVQQD
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