| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5716 |
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| Symbol | |
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| ID | 7975769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 430253 |
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| End bp | 431257 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796297 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947571 |
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| Protein GI | 239820386 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCACA GACGCTCGCT CGTCGCCGCA GGCCTGGCCC TGGCCTGCGC GGCACCCCTT
CACGGCCTGG CCCAGGGCTT CCCGGACAAG CCGATCAAGA TCTACCAGGG CTTCCCGGAC
AAGCCGATCA AGATCTACCA GGGCTTTGCG GCCGGCGGCA ACGCCGACAC CATCGCGCGC
GTGGTCAGCA CGGAAATGGC CAAGGGGCTC GGCCAGCCCT TCGTGGTCGA AGCGCAGACC
GGCGCGGGCG GCACCATTGC CTCGGGCACG GTGGCGCGCG CCAAGCCCGA CGGCTACACG
CTGCTGCTGG CCACGGGCGG CCACGCGGTG GCCGGCGCGC TCTACAACAA GCTCAGCTAC
CAGACAGTGA CGGACTTCCA GATGGTCTCG ACGATCACCT ACTTTCCGTT CCTGCTGGTG
GTGCGGGCCG ACTCGCCCTA CCGCGGGCTG GCCGAGATGC TCGCCGCGGC GCGTGCCGAT
GCGCGCGGCG TGTCGTACGG CTCGGCCGGC ATCGGCTCCA CGCATCATCT TGCGGGCGAG
CTGCTGGTGA AGAGCGCCAA TGTCGAGATG CTGCACATTC CCTACCGCGG CGATGCGGCC
TCGGTGGCGG CGCTGCTCGG CGGCGAGGTG CCGATGATCA TCGCGCCGCC CACGGCCGTG
CTGGCCAACA TCAAGGCCGG CAAGCTCCGC GCGCTGGCCA CCACCGGCGC ACAGCGCTGG
AGCCAGATGC CCGAGCTGCC GACCGTGGCC GAGCAGGGCG TGCCCGGCTA CGACGTGCGC
TCCTGGGCCG GCTTCATGGC GCCCGCGGGC ACGCCGCGCC CGGTCGTCGA CCGCCTGCGC
GCCGAAGCGC TCAAGGCCCT GCAGGCGCCG GCCGTGCGTG CGCGGCTCGA AGAAATGGGC
GGTGAAGCGC GCGGCAGCAC GCCCGAAGAA ATGACCGCCA TGGTGGCCGC CGAGCTCAAG
CGGTGGACCG CCGTGGTGAA CGATGCTCAC ATCCCCAAGC AATAA
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| Protein sequence | MWHRRSLVAA GLALACAAPL HGLAQGFPDK PIKIYQGFPD KPIKIYQGFA AGGNADTIAR
VVSTEMAKGL GQPFVVEAQT GAGGTIASGT VARAKPDGYT LLLATGGHAV AGALYNKLSY
QTVTDFQMVS TITYFPFLLV VRADSPYRGL AEMLAAARAD ARGVSYGSAG IGSTHHLAGE
LLVKSANVEM LHIPYRGDAA SVAALLGGEV PMIIAPPTAV LANIKAGKLR ALATTGAQRW
SQMPELPTVA EQGVPGYDVR SWAGFMAPAG TPRPVVDRLR AEALKALQAP AVRARLEEMG
GEARGSTPEE MTAMVAAELK RWTAVVNDAH IPKQ
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