| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5710 |
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| Symbol | |
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| ID | 7975763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 424743 |
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| End bp | 425453 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796291 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947565 |
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| Protein GI | 239820380 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0684] Demethylmenaquinone methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0298234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATCCCC AAACCCGCGA GAAGCTGATG AAGGTCAGCA CCGCCACCCT GTGCACGGCG
CTGTTCAAGC GCGGACTGCG CAACCAGTTC ATCCAGGACG TGCATCCGCT CGACCCGACG
CTTCCCAACA TGGTCGGCGA GGCCTTCACG CTGCGCTACA TGCCGGCGCG CGAGGACCTG
AACCCGATCA CCGTGTTCAA CGACCGCAGC CATCCGCAGC GCCAGGCCGT GGAGCAGTGC
CCGGTGGGCG CGGTGCTGCT GATGGACAGC CGCAAGGACG CGCGCGCCGC CTCGGCCGGC
GGCATCCTGG TGAGCCGGCT CATGAAGCGC GGCGTGGCCG GCGTGGTCAC CGACGGGGGC
TTTCGCGACA GCCCCGACAT CGCGAAGCTC GGCTTTCCCG CCTACCACCA GCGCCCGAGC
GCGCCCACCA ACCTGACCTT GCACCAGGCG ATCGACATCA ACGTGCCGAT CGGCTGCGGC
GACGTGGCCG TGTGGCCCGG CGACGTGGTG GTGGGCGATG CCGAAGGCGT CATCGTGATT
CCGGCGGCCA TGGCCGACGA GGTCGCGGCC GAGGCCACCG AGATGACCGT CTTCGAGGAC
TTCGTGCAGG AGAAGGTGCT CGAGGGCCGC TCCATCCTCG GCCTCTATCC GCCGACCGAC
GAGCAAAGCC GCACCGAGTT CGCCGCCTGG CGCGAGGCCC GCGGGCGCTG A
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| Protein sequence | MNPQTREKLM KVSTATLCTA LFKRGLRNQF IQDVHPLDPT LPNMVGEAFT LRYMPAREDL
NPITVFNDRS HPQRQAVEQC PVGAVLLMDS RKDARAASAG GILVSRLMKR GVAGVVTDGG
FRDSPDIAKL GFPAYHQRPS APTNLTLHQA IDINVPIGCG DVAVWPGDVV VGDAEGVIVI
PAAMADEVAA EATEMTVFED FVQEKVLEGR SILGLYPPTD EQSRTEFAAW REARGR
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