| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5709 |
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| Symbol | |
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| ID | 7975762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 423713 |
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| End bp | 424696 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796290 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947564 |
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| Protein GI | 239820379 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.21123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTCA TCCAACGCGC CGCGGGCCTT TTGCTCGCCG CACTTGCATT GGCCCCGGCC
GCGGCCCTCG CACAAGCCGA ATGGCCCGCC GCCAAGACCA TCACCTACGT CGTGCCCTTC
ACGGCCGGCG GCTCCACCGA CATCGTGGGC CGCATCCTGT CGAACAAGCT GCAGGAGAGC
CTTCACCAGT CGGTGGTGGT GGACAACAAG CCGGGGCAGG CCGGCGGCAT CGGAGCGGCC
TACGTGGCCA AGGCCGCGCC CGACGGCTAC ACGCTGTTCG GCGGCACCAT CAGCACGCAC
GCCATCAACG CCAGCCTCTA CAAGAAGCTG CCCTACGATC CGATGAAGGA CTTCGAGCCC
GTGTCGCTGG TCGGGCGGCT GCCCAACGTG CTGATCGTCA ACAGCCAGCT CGGCGTGAAC
TCGGTGGCCG AACTCATCGC GCTGCTCAAG AAGGACGAGT CCAAGCGCAC CTTCGCATCG
TCCGGCGCCG GCACCTCGAC GCACCTGGCG GGCGAGATGT TCGCCGACAT GATCGGCGTG
AAGCTCACGC ACGTGCCGTA CAAGGGCACG CCGCCGGCCA TGACCGACGT CGCGTCGGGC
CTGGTGCCCT TCATGTTCGA CCAGGTGACG GCCGCGCTGC CGCTCGTCAA GAGCGGCCGG
CTCAAGCTGC TGGCCGTGAC CACCGGCAAG CGCATCGCGC TGGTGCCCGA ACTGCCCACC
ATGATCGAGT CGGGCGTGCC GGGCTTCGAG ATGTCGTCGT GGCAGGCGGT CTATGCGCCC
AAGGGCACGC CCAAGCCCAT CGTGCAGCGT TTGAATGCCG AGATCGTCAA GGCGCTGAAG
CAGCCCGACG TGCAGGCCAA GCTCTCGGGC CAGCTGGCGA TGGAGATCGT CGGCAGCACG
CCCGAGGAAC TGCGCGACCA CATGGCGCGT GAGATCCCGC GCTGGGCCGA GCTGGTGAAG
AAGTCGGGCG CGACCGCGGA CTGA
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| Protein sequence | MPFIQRAAGL LLAALALAPA AALAQAEWPA AKTITYVVPF TAGGSTDIVG RILSNKLQES
LHQSVVVDNK PGQAGGIGAA YVAKAAPDGY TLFGGTISTH AINASLYKKL PYDPMKDFEP
VSLVGRLPNV LIVNSQLGVN SVAELIALLK KDESKRTFAS SGAGTSTHLA GEMFADMIGV
KLTHVPYKGT PPAMTDVASG LVPFMFDQVT AALPLVKSGR LKLLAVTTGK RIALVPELPT
MIESGVPGFE MSSWQAVYAP KGTPKPIVQR LNAEIVKALK QPDVQAKLSG QLAMEIVGST
PEELRDHMAR EIPRWAELVK KSGATAD
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