Gene Vapar_5696 details

Gene Information

• Locus tag: Vapar_5696
• ID: 7975749
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012792
• Strand: -
• Start bp: 410484
• End bp: 411263
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644796278
• Product: protein of unknown function DUF81
• Protein accession: YP_002947552
• Protein GI: 239820367

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAAGCGA TTCTTTCCGA AGCCGGCCCC GTGCTGGTCT TCATGGCCTG CGTGGCGCTG 
GCCACTTATG CGCAGAACCT CACGGGGTTC GCATTCAGCC TCATCCTGCT CGGCCTGGTG 
TCGGTGTTCC ACGTCGCCAG CGTGGGCGAC ACGGCCAACG CCGCCACGGT GCTGAGCCTG 
ATCAATGCAT GGACCTATTT CCGCGCGCGG CCCGGCGTGG TGCCGTGGCG GCTGATGAAG 
CCGGCGCTCA ACGGCAGCAC CGTGGGCGTG ATCGCGGGGC TCATGCTGCT CACCTGGCTC 
AGCGGCGGCG CGGTGAACTG GCTGCGCGGC CTGCTGGGCA TGTCGATCCT GGGCTGCGCG 
CTGCTGCTGG TGCTGCAGGG CCGGCCGCAG CCCGCGGTGT CGGGCCGCAC GAGCTTTGCC 
GTCATCGGCG GGCTCTCGGG CGTGCTGGGC GGGCTGTTCT CGAGCTCGGG GCCGCCCATC 
GTCTTTCACA TGTACCGCCA GCCGCTGGAG CGCGAACTGG TGCGCCGCGC GCTGCTGCTG 
ATGTTCGCGT TCAATTCGCT GGTGCGGCTG GTGATCGTGC TGCCCACGGG GCACTTCTCG 
TGGCGCGCGG CGCTGTTGGC CGCCTGCGCA ATGCCGGTGG TCTACGGCGT GACGCGGTTG 
CACCACCGGC TGCCCAACAA GCTGCAGCCG CGCACCCTCC AATGGCTGGT GGGCGGCCTG 
CTGGCCGCGG CGGGTTCGAC GCTGGTCGCG AGCGCGTGGC TGGCGATTGC GCAGGGCTGA 

 

Protein sequence

MQAILSEAGP VLVFMACVAL ATYAQNLTGF AFSLILLGLV SVFHVASVGD TANAATVLSL 
INAWTYFRAR PGVVPWRLMK PALNGSTVGV IAGLMLLTWL SGGAVNWLRG LLGMSILGCA 
LLLVLQGRPQ PAVSGRTSFA VIGGLSGVLG GLFSSSGPPI VFHMYRQPLE RELVRRALLL 
MFAFNSLVRL VIVLPTGHFS WRAALLAACA MPVVYGVTRL HHRLPNKLQP RTLQWLVGGL 
LAAAGSTLVA SAWLAIAQG