Gene Vapar_5694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5694 
Symbol 
ID7975747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp408949 
End bp409914 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content69% 
IMG OID644796276 
ProductPhthalate 4,5-dioxygenase 
Protein accessionYP_002947550 
Protein GI239820365 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCT CCGAACTGAA CGTGCGCGTC GCCCGCAAGC ATGCGGAGGC GCTGGACATC 
TGCACCTTCG AGCTGGTGCA CGCCGAGGGG CAGGCCCTGC CGGCGTTCTC GGCCGGCTCG
CACATCGACG TGCACCTGCC AAACGGCCTT ACGCGCCAGT ACTCGCTGTG CAACGATCCG
CAGGAGAGCC ACCGCTACCT GATCGGCGTG CTGCGCGATC CTGCATCGCG CGGCGGCTCG
CAGGCGATGC ACGAGCTGGT GCAGGAAGGC AGCCTGCTGC GCATCAGCGC ACCGAAGAAC
CACTTTCCGC TGGCCCACGC GGCCACCCGC AGCGTGCTGA TCGCAGGCGG CATCGGCGTG
ACGCCGATCC TGTGCATGGC CGAGCGGCTG GCACTGAGCG CAGCGCCGTT CGAGATGCAC
TACTGCACGC GCTCGCGCGA GCGCACCGCC TTTGCCGGGC GCATCGCGCA GTCCGCGTTC
GCATCGCAGG TGCAGTTTCA CTTCGACGAC GGGGACGCGG CGCAGAAGCT GTCGCTGCCG
GCGGCAATCG GCACGCCGCA GCCCGGCGTG CACCTGTATG TCTGCGGCCC CAAGGGCTTC
ATGGACTGGG TGCTGGATGG CGCGCGCACC GCCGGCTGGC CGGCCGAGCA GCTGCACTAC
GAGTTCTTCT CGGCCGAGAT CGCCGCGTCG GACACCGATG CGGAATTCCA GGTCAAGCTC
GCAAGCTCGG GGCGCATCGT CACGGTGCCC AAGGATTGCA CGGTGGTGCA GGCGCTTGCC
GCGGCGGGCG TCGAGGTGGC GACCTCCTGC GAACAGGGCG TGTGCGGCAC CTGCCTCACG
CGCGTGCTCG AAGGCGAGCC GGACCACAAG GACATGTACC TGTCGCCCGA AGAACAGGCG
GCCAACGACC AGTTCACTCC CTGCTGCTCG CGCTCGCGCT CGCCGATGCT GGTGCTCGAC
CTGTAG
 
Protein sequence
MNASELNVRV ARKHAEALDI CTFELVHAEG QALPAFSAGS HIDVHLPNGL TRQYSLCNDP 
QESHRYLIGV LRDPASRGGS QAMHELVQEG SLLRISAPKN HFPLAHAATR SVLIAGGIGV
TPILCMAERL ALSAAPFEMH YCTRSRERTA FAGRIAQSAF ASQVQFHFDD GDAAQKLSLP
AAIGTPQPGV HLYVCGPKGF MDWVLDGART AGWPAEQLHY EFFSAEIAAS DTDAEFQVKL
ASSGRIVTVP KDCTVVQALA AAGVEVATSC EQGVCGTCLT RVLEGEPDHK DMYLSPEEQA
ANDQFTPCCS RSRSPMLVLD L