| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5687 |
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| Symbol | |
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| ID | 7975740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 400450 |
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| End bp | 401877 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796269 |
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| Product | putative copper resistance-related lipoprotein |
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| Protein accession | YP_002947543 |
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| Protein GI | 239820358 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCG CCTTGCGCCT CACGGCCGCG GCCGCTGCTG CGGCCCTCTT GCTGGCCGGC
TGCGCCTCGG TCGGCATCGA CGACGCGCTG CAGGACACCA ACACCCAGGC CCAGCAGTTC
ACCGGCGGCA AGCTCGAACT CAGCCGCACG CAGGAACAGC GCGACCGCCG CGCCGCGCTC
GCGCAGGAGC TGCTGTCCAG GCCGATTTCG CAAAGCGACG CGGTGCAGCT CGCGCTCACC
AACAGCCCCG CGGTGCAGGC GCTGGTCGCG CAGAGCTGGG GCGACATCGC CGCGGCCAAC
CAGTCGAGCC GGCTGCCCAA CCCGGTCTTC AGCTTCGAGC GCATGCGCCT GGGCAGCGAG
CTCGAACTCG GGCGGCTCCT GTCCTTCGGC CTCGTGGACC TCATCCTGCT GCCGCAGCGC
CTGTCGATCT CGCGCAGCCA ATCGAGCCAG GCCAAGGTGC AGCTCACCGG CGCCGTGGTG
GACCAGGTCA CGCAGGTGCG GCAGGCCTGG GTCCGCGCGG TGGCCGCGCA GCAGATGCTG
CGCTATGCCG AGCAGGTCAA CCGATCGGCC CAGGCCAGCG CGGAACTCGC GCGGCGCATG
CAGCAGATCG GCAACTTCAG CAAGCTGCAG CGCGCGCGCC AGCAGGTCTT CTATGCCGAC
GCGACCGCGC AGCTGGCCTC GGCGCAGCAC GCCGCCACTG CTGCGCGCGA GGAGCTGGTG
CGTGCCTTGG GGCTCGACGA TGCGCAGGCC GCTCAACTGG CCTTGCCCGA TCGGCTGCCC
GATCTGCCAA AGGCGCCGCG CGAGGCCAAG GAAGTGGCCG CCACCGCGAC CGAGCAGCGG
CTGGACGTGC AGCTCGCGCG CGCGCAGCTC GACGTGGCGG GCAAGTCGCA GGGCATCAAC
CTGCTGTCGA CCTTCGTCGA CGTGGAGGTG GGCGGCCGGC GCGACACCGT GTTCGACAAC
GCCGAAGGCA CCAAGGGCAC GCGGCGCGGC TTCGAGCTCG ACATCCGGCT GCCGCTGTTC
GACTGGGGCT CGGCGCAGCG CGATGCACTG AACGCGCAAT CGCTCGCCGC AGCCAACCGC
TACGACGCCA CGGTGCGCGG CGCTTCTTCC CAGCTGCGCG AAGGCTACTC GGCCTACCGC
ACTGCCTACG ACATCGCGCG GCACTACCGC GACGAGATCG TGCCGCTGCG CCAGGCCATG
GCCGACGAGA ACGTGCTTCG CTACAACGGC ATGCTGATCG GCGTCTTCGA GCTGCTGGCC
GAGGCGCGCG ACCAGATCGC GAGCGTGAGC AACGCCATCA ACGCCCAGCA GCAGTTCTGG
CTGGCCGATG CCGCGCTGGC GGCCTCGGTG ATCGGCAAGC CCACGGCCAT GGGTGCTTCG
ACCGCCAGTG CGGGCGCTGA AGCCGCCTCC GCAAATGCCG GCCACTGA
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| Protein sequence | MKRALRLTAA AAAAALLLAG CASVGIDDAL QDTNTQAQQF TGGKLELSRT QEQRDRRAAL
AQELLSRPIS QSDAVQLALT NSPAVQALVA QSWGDIAAAN QSSRLPNPVF SFERMRLGSE
LELGRLLSFG LVDLILLPQR LSISRSQSSQ AKVQLTGAVV DQVTQVRQAW VRAVAAQQML
RYAEQVNRSA QASAELARRM QQIGNFSKLQ RARQQVFYAD ATAQLASAQH AATAAREELV
RALGLDDAQA AQLALPDRLP DLPKAPREAK EVAATATEQR LDVQLARAQL DVAGKSQGIN
LLSTFVDVEV GGRRDTVFDN AEGTKGTRRG FELDIRLPLF DWGSAQRDAL NAQSLAAANR
YDATVRGASS QLREGYSAYR TAYDIARHYR DEIVPLRQAM ADENVLRYNG MLIGVFELLA
EARDQIASVS NAINAQQQFW LADAALAASV IGKPTAMGAS TASAGAEAAS ANAGH
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