| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5686 |
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| Symbol | |
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| ID | 7975739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 398997 |
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| End bp | 400412 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796268 |
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| Product | multicopper oxidase type 3 |
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| Protein accession | YP_002947542 |
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| Protein GI | 239820357 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAACA GACGCAACTT TCTCGGCGGC GCCGGCGCCA TCACCGGCGC CCTTGCCGCC
GCGAGCGTGA GCAAGGTGGC CATGGCCGCG CTGCCCGAGC CCGTGACCCA GACCACGCCC
AACACCATGC CGCCGCTCAT GCCACCCGGT GGTCGGCCCT ACAACCCCGT GGTCACGCTC
AACGGCTGGA CGCTGCCCTG GCGCATGAAC AACGGCGTGA AGGAATTCCA CCTGGTGGCC
GAGCCTGTGG TGCGCGAGAT GGCGCCCGGC TTCAAGGCCA ACCTGTGGGG CTACAACGGC
CAGTCGCCAG GCCCGACCAT CGAGGTGGTC GAAGGCGACC GCGTGCGCAT CTTCGTGACC
AACAAGCTGC CCGAGCACAC CAGCGTGCAC TGGCACGGCC AGCGCCTGCC CAACGGCATG
GACGGCGTCT CGGGTCTGAC CCAGCCGCCG ATCCGCCCCG GCAAGACCTT CGTCTACGAG
TTCGTCGCGC GCCGCCCCGG CACCTTCATG TACCACCCGC ATGCGGACGA GATGACGCAG
ATGGCCATGG GCATGATGGG CTTCTGGGTG ACGCACCCCA AGGCCGAGCA TCCGCTGATC
GAGAAGGTCG ACCGCGACTT CGTGTTCCTG CTCAACGCCT ACGACGTGGA GCCCGGCAGC
GCCACGCCCA AGATCATGAC CATGCTGGAC TTCAACCTGT GGTCCTGGAA CAGCCGCATC
TTTCCGGGCA TCGACTCGCT CAACGTGCGG CTCAACGACA AGGTGCGCAT CCGCATCGGC
AATCTCACGA TGACCAACCA CCCGATGCAC CTGCACGGGC ACGAGTTCCT CGTCACCGGC
ACCGATGGCG GGCCGACGCC CAAAAGCACG CGCCAGTACG AGGTGACCAC CGACGTCGCC
GTCGGCCAGA TGCGCCAGAT CGAGTTCCTG GCCGACGAGG AGGGCGACTG GGCCTTCCAC
TGCCACAAGA GCCATCACAC CATGAACGCG ATGGGCCACG ACGTGCCCAC CCTCATCGGC
CTGGACCACA AGGACGTGGC CCGGCAGATC ACGAACCTGG TGCCCGACTA CATGGTGATG
GGAGAGCGCG GCATGGCCGA CATGGGCGAG ATGGAAATGC CCATTCCCGA CAACACCGCG
CGAATGATGA CCGGCGAAGG GCCCTTCGGC TCGGTCGAGA TGGGCGGCAT GTTCAGCATG
GTGAAGGTGC GCAGGAACCA GAAGCCCGGC GACTACAGCA ACCCCGGCTG GTTCAAGCAC
CCCAAGGGCA CCGTGGCCTA CGAGCTCGAC GGACCCGCGC CCGAAACCTC GCGCCAGCGC
GATGCCGGCG CGGCCGCGAT GCCTGCGCGG AACATGCCCG CGAAGAACAT CGAAGTGCAG
ATCCGCAAGC CCGGCAGCGG CCATTCCGGC CACTGA
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| Protein sequence | MTNRRNFLGG AGAITGALAA ASVSKVAMAA LPEPVTQTTP NTMPPLMPPG GRPYNPVVTL
NGWTLPWRMN NGVKEFHLVA EPVVREMAPG FKANLWGYNG QSPGPTIEVV EGDRVRIFVT
NKLPEHTSVH WHGQRLPNGM DGVSGLTQPP IRPGKTFVYE FVARRPGTFM YHPHADEMTQ
MAMGMMGFWV THPKAEHPLI EKVDRDFVFL LNAYDVEPGS ATPKIMTMLD FNLWSWNSRI
FPGIDSLNVR LNDKVRIRIG NLTMTNHPMH LHGHEFLVTG TDGGPTPKST RQYEVTTDVA
VGQMRQIEFL ADEEGDWAFH CHKSHHTMNA MGHDVPTLIG LDHKDVARQI TNLVPDYMVM
GERGMADMGE MEMPIPDNTA RMMTGEGPFG SVEMGGMFSM VKVRRNQKPG DYSNPGWFKH
PKGTVAYELD GPAPETSRQR DAGAAAMPAR NMPAKNIEVQ IRKPGSGHSG H
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