| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5657 |
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| Symbol | |
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| ID | 7975710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 362830 |
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| End bp | 363690 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796241 |
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| Product | NmrA family protein |
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| Protein accession | YP_002947515 |
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| Protein GI | 239820330 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACGTCA TCATGGGTGG TACGGGGCAT GTCGGTTCGG CGGTCGCGCA GGCGCTGCTC
GGCCGCGGCG AAGCAGTGAC GATCGTCACG CGCGACGCGA AGCGCGCAGG CGCGTGGCGC
GCAAAGGGCG CCGAGATTGC CGAGGCGAAT GCTGAAGACG TGGCGTCGCT GCGCGCGGCG
TTGCAGCGCG GGCGCCGCGC CTTCCTGCTC AATCCGTCCG CGGACACGTC GGCGGACACC
GACACCATCG AGCGGCGCAC GGTCGCCAAC ATCCTGCAGG CGCTCGAAGG CTCGGGGCTG
CAGAAGGTGG TGGCGGAATC GACCGGCGGC GCGCAGCCCG GCGAGCGCAT CGGCGACCTG
AGCGTGCTGT GGGAACTCGA AGAGGGCCTG CGCCGCCAAT CCATTCCGGC GGCGATCAAC
CGCGCGGCCT ACTACATGAG CAACTGGGAC GGACTGCTCG ATACGGTGCG CAGCACGGGC
AGGCTGCCCA CGATGTTCGA CCCCGAGCTT GCCATTCCCA TGGCCGCGCC GCACGACCTC
GGCGAGATCG CGGCCCGCAG GCTGGTGTCC CCGCTCGACG ACGTCGGCAT CCGCTACTTG
GAGGGCCCGC GGCGCTATAC CTCGGCCGAC GTGGCAAGGG CGTTCTCGGA GGCGCTCGGC
CGGCCGGTGG AACTCGACGT CACGCCCCGC GGCAAGTGGA AGGCAGCGTT CCGCGGCCTC
GGCTTTTCCG AAGCTGCCGC GGACTCGTAT GCGCGAATGA CCGCGGTGAG CGTCGACAGC
GGCTTCGAGA TGCCAGGCGA CGCGCTGCGC GGCTCGACGA CGCTCGAGGC CTACATCCGC
GGCCTGGTGG CGCGATCCTG A
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| Protein sequence | MYVIMGGTGH VGSAVAQALL GRGEAVTIVT RDAKRAGAWR AKGAEIAEAN AEDVASLRAA
LQRGRRAFLL NPSADTSADT DTIERRTVAN ILQALEGSGL QKVVAESTGG AQPGERIGDL
SVLWELEEGL RRQSIPAAIN RAAYYMSNWD GLLDTVRSTG RLPTMFDPEL AIPMAAPHDL
GEIAARRLVS PLDDVGIRYL EGPRRYTSAD VARAFSEALG RPVELDVTPR GKWKAAFRGL
GFSEAAADSY ARMTAVSVDS GFEMPGDALR GSTTLEAYIR GLVARS
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