| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5655 |
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| Symbol | |
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| ID | 7975708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 360919 |
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| End bp | 361905 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644796239 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947513 |
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| Protein GI | 239820328 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.315231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTCGA CAAAAAACCT CGTCAAGAAG ATGCTCGGCC TGGTGCTGGG CCTTGCCGGC
ATCCTGGCCA CGGGCCATGC AAGCGCCCAG GCCGCGGAGT GGCCCACCAA GCCGATCCGG
ATCGTGGTGG GCTTCGCGCC CGGCACGCCG CCCGACATCT TCGCGCGCAT GTACGGCGAC
TATGCGAGCC GCAAGCTCGG CGTGCCGGTG CTCATCGACA ACAAGCCCGG CACGGCCGGC
AACCTTGCGT CGGACACCGT CGCCAAGGCG CCGGCGGACG GCTACACCTT CCTCTACAAC
CTGTCGACCG CGTTCACGAT CAACCCGTAC ATCTACAGCA AGCTGCCGTT CGACCCCGAG
AAGGACCTGG TTCCCGTCGC CACCACGATG CGCCAGGGCC TCGTGCTGAT CGCCAACACC
AAGTTCCCGG CCAAGACCCT CAAGGAGCTC GTGGCCGCAG CCAAGGAAAA GCCCGGCACC
TATTCGCACG CCTCGTACGG CGCGGGAAGC CCTTCGCAGC TGATCGTCGA ATCGTTGAAG
GACGAGGTGG GCATCACCAT GCTGCATGTG CCCTACCGCG CGAGCCCCAT CGCCGATCTC
GTCGGCGGAC AGGTCGACAC CTTGATGGAA CCTATCGCCA CGGGCTACCC GCTGATCAGC
AGCGGCCGCG TGCAGGCGCT GGCCTACTCG GGCCCCACGC GGCACCCCGC GCTGCCCGAT
GTGCCCACGC TCTCGGAGGT GATGCCGGGC TTCTCGATGA TGTCGTGGCA CGGCATCTGG
GCGCCCGCGA ACACGCCGGC CGCGGTGCTC AACCGGTTCA ACGCGGTGTT CGTCGAAGCG
AGCAAGGACC CGGACCTTGC CAGGCGCATC AAGGACCTCA ACAGCGAGCC GCTGGGCGTC
ACGCGCACCG AGATGAGCGC GATGGTGCGC CGCGACGCGG AGATCTACAG CCGCGTCGTG
AAGGCGCGCA ACATCCGCGT GGATTGA
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| Protein sequence | MRSTKNLVKK MLGLVLGLAG ILATGHASAQ AAEWPTKPIR IVVGFAPGTP PDIFARMYGD
YASRKLGVPV LIDNKPGTAG NLASDTVAKA PADGYTFLYN LSTAFTINPY IYSKLPFDPE
KDLVPVATTM RQGLVLIANT KFPAKTLKEL VAAAKEKPGT YSHASYGAGS PSQLIVESLK
DEVGITMLHV PYRASPIADL VGGQVDTLME PIATGYPLIS SGRVQALAYS GPTRHPALPD
VPTLSEVMPG FSMMSWHGIW APANTPAAVL NRFNAVFVEA SKDPDLARRI KDLNSEPLGV
TRTEMSAMVR RDAEIYSRVV KARNIRVD
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