| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5652 |
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| Symbol | |
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| ID | 7975264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 358162 |
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| End bp | 359082 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796236 |
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| Product | Hydroxyquinol 1,2-dioxygenase |
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| Protein accession | YP_002947510 |
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| Protein GI | 239820325 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0157172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCAT CGAACGAAAG CGAGCTGACG CAGACCGTGC TGCAGAGCCT CGAGGGAACG
CGCGACGCGC GCTTCCTGCA GATCATGCAG TCGCTGATCA CGCACCTGCA TGCCTTCATC
CGCGAAGTGG ACCTGAAGCC CGACGAATGG ATGCAGGGCA TCGAGTTCCT GACGGCCACG
GGCCAGACCT GCACCGACAA GCGCCAGGAG TTCATCCTGC TGTCGGACAC GCTGGGCGCC
TCGATGATGG TCGTGATCCT GGACCAGCTG CGCGCCGCCG CCGGCAAGCG CGGCCGGGCC
GAGGCCAGCG AAGCCACGCA AGCCACCGAG CTCACCGAGG CCACGCACGC CACCGTGCAA
GGCCCCTTCT ACTGGGAGGG CGCGCCCGAC CTGCCACTGG GCGCCGACGT GGCCCAGGGC
GCCCGCGGCG AGCCGACCTT CTACAGCGGC CGCGTCACCG ACACCCGCGG CCAGCCGCTC
CAGGGTGCGC TGCTCGACAT CTGGTCGGGC GACGGCGAAG GCGTGTACGA CATGCAGCTC
GAAGGCGCCG CGATGCAGGC GCGCGGGCGC ATCCGCACCG ACCACGAAGG CCGATACTGG
TTCTGGTCGA TCCGCCCGAA CTTCTATCCG ATCCCGGTCG ACGGGCCCGT CGGCCGCATG
CTCGAAGCGA TGGGCCGCCA TCCGAACCGC CCCGGCCACA TCCACATGAT GGTCTCGGCG
CCGGGCCATG TGCCCGTGAC CACGCACCTG TTCGTGGCGG GCAGCCCGTA CATCGAGTCC
GATGCGGTGT TCGGCGTGCG GCCGCGGCTC GTCATCGACT TCGAGTCGCA TCCGCCGGGC
CGCGCGCCCG ATGGCAGGCC GCTGGAAACG CCCTACTGGT CCGCGCACTA CGACTTCCGC
CTCGAACCCC GACACGCCTG A
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| Protein sequence | MTPSNESELT QTVLQSLEGT RDARFLQIMQ SLITHLHAFI REVDLKPDEW MQGIEFLTAT
GQTCTDKRQE FILLSDTLGA SMMVVILDQL RAAAGKRGRA EASEATQATE LTEATHATVQ
GPFYWEGAPD LPLGADVAQG ARGEPTFYSG RVTDTRGQPL QGALLDIWSG DGEGVYDMQL
EGAAMQARGR IRTDHEGRYW FWSIRPNFYP IPVDGPVGRM LEAMGRHPNR PGHIHMMVSA
PGHVPVTTHL FVAGSPYIES DAVFGVRPRL VIDFESHPPG RAPDGRPLET PYWSAHYDFR
LEPRHA
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